Gene Bcenmc03_4575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4575 
Symbol 
ID6127396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1564328 
End bp1565179 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content64% 
IMG OID641651671 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001778204 
Protein GI170736944 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0133607 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCCGA CACCCGTTGC CCACTGGAAG CCGATATCGC GCCGGCTGTA CAAGCTGTCG 
CTGCCCGTCG CGCTCGCGAT CTGGCTGCTG CCGATGATCG CGGTGTTCGT CACGTCGGTG
CGCTCGACGG AGGAACTCGT CGAAGGCCAC TACTGGGGCT GGCCGCGGCA TTTCTCGATG
ATCGAGAACT ATCGCGACGC GCTGACGACG TCGCCGATGC TGCATTACTT CTGGAACAGC
GTGCAGATCA CGGTGCCGTC GGTCATCGGC TCGATCGCGC TCGCGGCGAT GGCCGGCTTC
GCGCTCGCGA CCTACCGGTT TCGCGGCAAT ACCGCGCTGT TCGGCACGTT CGTCGCCGGC
AACTTCGTGC CGGTGCAGGT GCTGATGATT CCGGTGCGCG ACCTGTCGCT GCGGCTCGGC
GTGTTCAATA CCGTCGAAGC GCTGATCCTG TTCCACGTCG CGTTTCAGAC GGGCTTCTGC
ACGCTGTTCC TGCGCAACTT CATCAAGCAG TTGCCGTTCG AGCTGATCGA AGCGGCACGC
ATCGAAGGCG CGGGCGAATG GACGGTGTTC TGGCGCATCG TGCTGCCGCT GATCCGGCCG
GCGCTGGCCG CGCTCGCGAT TCTCGTGTTC ACGTTCGTGT GGAACGATTA CTTCTGGGCG
CTGTGCCTCA CGCAAGGCGA TGAGGCCGCG CCGATCACGG CGGGTGTCGC GGCGCTGAAG
GGGCAATGGA CGACGTCGTG GAACCTTGTG TCCGCCGGGT CGATTCTCGC CGCACTGCCG
TCGGTCGCGA TGTTTTTCGC GATGCAGAAG CATTTCGTCG CGGGGCTCAC GTTCGGCGCG
ACGAAAGGCT GA
 
Protein sequence
MFPTPVAHWK PISRRLYKLS LPVALAIWLL PMIAVFVTSV RSTEELVEGH YWGWPRHFSM 
IENYRDALTT SPMLHYFWNS VQITVPSVIG SIALAAMAGF ALATYRFRGN TALFGTFVAG
NFVPVQVLMI PVRDLSLRLG VFNTVEALIL FHVAFQTGFC TLFLRNFIKQ LPFELIEAAR
IEGAGEWTVF WRIVLPLIRP ALAALAILVF TFVWNDYFWA LCLTQGDEAA PITAGVAALK
GQWTTSWNLV SAGSILAALP SVAMFFAMQK HFVAGLTFGA TKG