Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0614 |
Symbol | |
ID | 8324774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 676917 |
End bp | 677777 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644941155 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003098423 |
Protein GI | 256374763 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGGGGCG TTCGGGCGGG AACTGTCGCG CTGCACGGTT TCCTGGTGCT GGCGTGCCTC GGGACGATCG CGCCGCTGCT GTGGGCGCTG TACGCGTCGC TGCGCAGCTA CGACGACACG GCGCGGAACG GGTACTTCTC GGTCGCCGAG GAGCTGACGC TGGCGAACTA CGCGGAGGCG TGGACGCGGG CCGAGCTGCC GCGCTACTAC CTGAACACGC TGGTGGTGGC GCTGCCGTCG GTGGTGCTGG TGCTGCTGCT CAGCTCGATG GCGGCGTTCG GCGTGGCCAG GCTGCCGAGG CGGCTGAACC TGGGGCTGCT GATGCTGTTC ACCGCGGGGA ACCTGCTGCC GCAGCAGGTG GTCGTGACGC CGCTGTACCG GCTGTACCTG CTGACGCCGG TGCCCGCGTG GGTGAGCGAC AGCGGGGTGC TGCTGGACTC GCGGCTGGGC CTGGTGCTGA TCCACGTGGC GTTCCAGTCG GGGTTCTGCG TGTTCGTGCT GAGCAACTTC ATGAAGACCA TCCCGCGCGA GATCGGCGAG GCCGCGCGCG TGGACGGGGC GGGGGTGTGG CGGCGGTACT GGCAGGTGGT GCTGCCGCTG TGCAGACCCG CGCTGGCGGC GCTGGCGACG CTGGAGTTCA CCTGGATCTA CAACGACTTC CTGTGGGCGC TGGTGCTGAT CCAGACCGGC GAGAAGATGC CGGTGACGTC GGCGCTGCAG AACCTGCGGG GGGCGTTCTT CACGGACAAC AACCTGGTGG CGGCGGGGGC GCTGCTGGTG GCGCTGCCGA CGCTGGTGGT GTTCTTCGTG CTCCAGCGGC AGTTCGTGGG CGGGTTGACG CTGGGGGCGA CGAAGGGGTG A
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Protein sequence | MRGVRAGTVA LHGFLVLACL GTIAPLLWAL YASLRSYDDT ARNGYFSVAE ELTLANYAEA WTRAELPRYY LNTLVVALPS VVLVLLLSSM AAFGVARLPR RLNLGLLMLF TAGNLLPQQV VVTPLYRLYL LTPVPAWVSD SGVLLDSRLG LVLIHVAFQS GFCVFVLSNF MKTIPREIGE AARVDGAGVW RRYWQVVLPL CRPALAALAT LEFTWIYNDF LWALVLIQTG EKMPVTSALQ NLRGAFFTDN NLVAAGALLV ALPTLVVFFV LQRQFVGGLT LGATKG
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