Gene Rsph17029_3407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3407 
Symbol 
ID4898959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp474471 
End bp475304 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content64% 
IMG OID640114004 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001045272 
Protein GI126464159 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.353789 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.790416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTGG GTCGCAAATC CACCCTCCGG CGGATCCTGA CCGTCGATCT GCCGATGGTC 
CTGATCCTCG TCTTCACGCT CGGCCCCTAC CTCTGGATGG CGCTGACCTC GCTCACGGCC
GAGGACAAGC TCTTCACCCG CGGCCCCTCG GTCTTCGACC TCGTCTGGGA GAACTATGCC
CGCCTCTTCG CCAACGTGGG CTTCGCGCGC AACATGCTCG ACAGCCTGAT CGTGGCCTCG
GGCACCGTGG TGGTGGGCCT CACCCTGTCG GTGACGGCGG CCTACAGCTT CTCGCGCTTC
GACTTCCGCT TCAAGCGCGT GCTGCTGCTG CAGTTTCTGC TCATCAACAT GTTCCCGCTG
GTGCTTCTGA TCCTGCCGCT CTTCGTGCTG ATGCGCCAGC TCGGACTTCT GGACACGCAT
CTCGCGCTCA TCATCGCGAA CTCGACCATC GCCATTCCCT TCTCGGTCTG GATGATGACG
AGCTACATCA ACGGTATCCC GAAATCGCTG GACGAGGCGG CCATGACCGA CGGTTGCTCG
CGGCTCTCGG CCATGGTGCG GGTGATCCTG CCGCTCTGCG CGCCCGGCAT CATCGCGACC
GGCATCTACA TCTTCATCAC CGCCTGGAAC GAATATCTCT ATGCCCTGAC GCTGGGTGGC
CAGAACGTGC GGCCCATCAC GGTCGCGGTG CAGACCATGA TCGGCGAATA TCAGGTCCAG
TGGGGCCTCC TGACCGCCGG CGGCATCGTG GGCGCCATGC CCGCCACCCT TCTGTTCCTG
ATCGTGCAGC GGCGCCTCGT GGGCGGCCTG ACCCAGGGCG CCGTGAAGGG CTGA
 
Protein sequence
MALGRKSTLR RILTVDLPMV LILVFTLGPY LWMALTSLTA EDKLFTRGPS VFDLVWENYA 
RLFANVGFAR NMLDSLIVAS GTVVVGLTLS VTAAYSFSRF DFRFKRVLLL QFLLINMFPL
VLLILPLFVL MRQLGLLDTH LALIIANSTI AIPFSVWMMT SYINGIPKSL DEAAMTDGCS
RLSAMVRVIL PLCAPGIIAT GIYIFITAWN EYLYALTLGG QNVRPITVAV QTMIGEYQVQ
WGLLTAGGIV GAMPATLLFL IVQRRLVGGL TQGAVKG