Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3407 |
Symbol | |
ID | 4898959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | - |
Start bp | 474471 |
End bp | 475304 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640114004 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001045272 |
Protein GI | 126464159 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.353789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.790416 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCTGG GTCGCAAATC CACCCTCCGG CGGATCCTGA CCGTCGATCT GCCGATGGTC CTGATCCTCG TCTTCACGCT CGGCCCCTAC CTCTGGATGG CGCTGACCTC GCTCACGGCC GAGGACAAGC TCTTCACCCG CGGCCCCTCG GTCTTCGACC TCGTCTGGGA GAACTATGCC CGCCTCTTCG CCAACGTGGG CTTCGCGCGC AACATGCTCG ACAGCCTGAT CGTGGCCTCG GGCACCGTGG TGGTGGGCCT CACCCTGTCG GTGACGGCGG CCTACAGCTT CTCGCGCTTC GACTTCCGCT TCAAGCGCGT GCTGCTGCTG CAGTTTCTGC TCATCAACAT GTTCCCGCTG GTGCTTCTGA TCCTGCCGCT CTTCGTGCTG ATGCGCCAGC TCGGACTTCT GGACACGCAT CTCGCGCTCA TCATCGCGAA CTCGACCATC GCCATTCCCT TCTCGGTCTG GATGATGACG AGCTACATCA ACGGTATCCC GAAATCGCTG GACGAGGCGG CCATGACCGA CGGTTGCTCG CGGCTCTCGG CCATGGTGCG GGTGATCCTG CCGCTCTGCG CGCCCGGCAT CATCGCGACC GGCATCTACA TCTTCATCAC CGCCTGGAAC GAATATCTCT ATGCCCTGAC GCTGGGTGGC CAGAACGTGC GGCCCATCAC GGTCGCGGTG CAGACCATGA TCGGCGAATA TCAGGTCCAG TGGGGCCTCC TGACCGCCGG CGGCATCGTG GGCGCCATGC CCGCCACCCT TCTGTTCCTG ATCGTGCAGC GGCGCCTCGT GGGCGGCCTG ACCCAGGGCG CCGTGAAGGG CTGA
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Protein sequence | MALGRKSTLR RILTVDLPMV LILVFTLGPY LWMALTSLTA EDKLFTRGPS VFDLVWENYA RLFANVGFAR NMLDSLIVAS GTVVVGLTLS VTAAYSFSRF DFRFKRVLLL QFLLINMFPL VLLILPLFVL MRQLGLLDTH LALIIANSTI AIPFSVWMMT SYINGIPKSL DEAAMTDGCS RLSAMVRVIL PLCAPGIIAT GIYIFITAWN EYLYALTLGG QNVRPITVAV QTMIGEYQVQ WGLLTAGGIV GAMPATLLFL IVQRRLVGGL TQGAVKG
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