More than 300 homologs were found in PanDaTox collection
for query gene Ndas_0560 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_0560  binding-protein-dependent transport systems inner membrane component  100 
 
 
292 aa  583  1e-166  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.843262 
 
 
-
 
NC_009664  Krad_2142  binding-protein-dependent transport systems inner membrane component  73.82 
 
 
293 aa  409  1e-113  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1703  putative transport system permease ABC transporter protein  58.68 
 
 
292 aa  348  4e-95  Thermobifida fusca YX  Bacteria  normal  0.757038  n/a   
 
 
-
 
NC_014210  Ndas_2035  binding-protein-dependent transport systems inner membrane component  57.5 
 
 
291 aa  342  4e-93  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0974901  normal  0.381629 
 
 
-
 
NC_013521  Sked_05240  carbohydrate ABC transporter membrane protein  54.91 
 
 
312 aa  337  1.9999999999999998e-91  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2231  binding-protein-dependent transport systems inner membrane component  56.18 
 
 
297 aa  334  9e-91  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.807172 
 
 
-
 
NC_011886  Achl_3129  binding-protein-dependent transport systems inner membrane component  62.02 
 
 
313 aa  334  1e-90  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0180019 
 
 
-
 
NC_008541  Arth_3327  binding-protein-dependent transport systems inner membrane component  59.93 
 
 
314 aa  329  3e-89  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00328886  n/a   
 
 
-
 
NC_011886  Achl_0497  binding-protein-dependent transport systems inner membrane component  52.15 
 
 
306 aa  329  3e-89  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000825086 
 
 
-
 
NC_013172  Bfae_29710  carbohydrate ABC transporter membrane protein  58.14 
 
 
304 aa  328  9e-89  Brachybacterium faecium DSM 4810  Bacteria  normal  0.942295  n/a   
 
 
-
 
NC_013530  Xcel_2536  binding-protein-dependent transport systems inner membrane component  53.7 
 
 
306 aa  312  4.999999999999999e-84  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.250656  n/a   
 
 
-
 
NC_012669  Bcav_0791  binding-protein-dependent transport systems inner membrane component  55.15 
 
 
308 aa  311  1e-83  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.013285 
 
 
-
 
NC_012669  Bcav_3554  binding-protein-dependent transport systems inner membrane component  57.3 
 
 
274 aa  306  2.0000000000000002e-82  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.330294  normal  0.257699 
 
 
-
 
NC_013530  Xcel_2649  binding-protein-dependent transport systems inner membrane component  50.55 
 
 
300 aa  300  1e-80  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5582  ABC transporter membrane spanning protein (galacturonic acid)  49.32 
 
 
293 aa  295  9e-79  Agrobacterium vitis S4  Bacteria  normal  0.542291  n/a   
 
 
-
 
NC_012669  Bcav_1532  binding-protein-dependent transport systems inner membrane component  53.38 
 
 
305 aa  292  4e-78  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.995394  normal  0.0303683 
 
 
-
 
NC_009636  Smed_3327  binding-protein-dependent transport systems inner membrane component  52.24 
 
 
295 aa  290  2e-77  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.925961 
 
 
-
 
NC_012669  Bcav_0802  binding-protein-dependent transport systems inner membrane component  53.52 
 
 
286 aa  290  2e-77  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.0123708 
 
 
-
 
NC_012669  Bcav_3897  binding-protein-dependent transport systems inner membrane component  50.18 
 
 
289 aa  289  4e-77  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.858464 
 
 
-
 
NC_011369  Rleg2_4017  binding-protein-dependent transport systems inner membrane component  47.6 
 
 
292 aa  280  2e-74  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.924355  normal 
 
 
-
 
NC_013530  Xcel_0899  binding-protein-dependent transport systems inner membrane component  51.97 
 
 
308 aa  279  4e-74  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.408611  n/a   
 
 
-
 
NC_012850  Rleg_4346  binding-protein-dependent transport systems inner membrane component  47.26 
 
 
292 aa  279  5e-74  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  hitchhiker  0.0000934569 
 
 
-
 
NC_012669  Bcav_0921  binding-protein-dependent transport systems inner membrane component  51.2 
 
 
284 aa  278  1e-73  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0972  binding-protein-dependent transport systems inner membrane component  50.18 
 
 
276 aa  276  4e-73  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0591  binding-protein-dependent transport systems inner membrane component  52.16 
 
 
300 aa  275  5e-73  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.303793  normal  0.0150565 
 
 
-
 
NC_008541  Arth_3322  binding-protein-dependent transport systems inner membrane component  47.78 
 
 
309 aa  273  2.0000000000000002e-72  Arthrobacter sp. FB24  Bacteria  normal  0.0903437  n/a   
 
 
-
 
NC_011886  Achl_3122  binding-protein-dependent transport systems inner membrane component  48.38 
 
 
305 aa  271  7e-72  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.290341 
 
 
-
 
NC_013521  Sked_05440  carbohydrate ABC transporter membrane protein  46.45 
 
 
307 aa  268  5.9999999999999995e-71  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.050978  normal 
 
 
-
 
NC_013205  Aaci_2458  binding-protein-dependent transport systems inner membrane component  44.93 
 
 
281 aa  261  6.999999999999999e-69  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.162326  n/a   
 
 
-
 
NC_012034  Athe_2079  binding-protein-dependent transport systems inner membrane component  44.44 
 
 
280 aa  258  9e-68  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.697078  n/a   
 
 
-
 
NC_013517  Sterm_4048  binding-protein-dependent transport systems inner membrane component  38.93 
 
 
287 aa  242  5e-63  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0699  binding-protein-dependent transport systems inner membrane component  39.71 
 
 
301 aa  241  1e-62  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0439  binding-protein-dependent transport systems inner membrane component  41.01 
 
 
279 aa  238  8e-62  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0806983  n/a   
 
 
-
 
NC_010001  Cphy_3400  binding-protein-dependent transport systems inner membrane component  43.73 
 
 
283 aa  233  2.0000000000000002e-60  Clostridium phytofermentans ISDg  Bacteria  normal  0.372936  n/a   
 
 
-
 
NC_012034  Athe_2374  binding-protein-dependent transport systems inner membrane component  41.26 
 
 
285 aa  232  5e-60  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1800  binding-protein-dependent transport systems inner membrane component  37.67 
 
 
306 aa  228  1e-58  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.429267  n/a   
 
 
-
 
NC_010159  YpAngola_A2646  oligogalacturonide ABC tansporter, permease  37.67 
 
 
306 aa  228  1e-58  Yersinia pestis Angola  Bacteria  normal  0.559892  normal  0.131938 
 
 
-
 
NC_009708  YpsIP31758_1690  oligogalacturonide ABC tansporter, permease protein  37.67 
 
 
306 aa  228  1e-58  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.064753  n/a   
 
 
-
 
NC_009436  Ent638_3290  binding-protein-dependent transport systems inner membrane component  36.27 
 
 
300 aa  227  2e-58  Enterobacter sp. 638  Bacteria  normal  normal  0.237365 
 
 
-
 
NC_009654  Mmwyl1_0775  binding-protein-dependent transport systems inner membrane component  37.1 
 
 
303 aa  221  1.9999999999999999e-56  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_1906  binding-protein-dependent transport systems inner membrane component  37.63 
 
 
301 aa  218  7e-56  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.207694  n/a   
 
 
-
 
NC_012912  Dd1591_1968  binding-protein-dependent transport systems inner membrane component  36.77 
 
 
300 aa  218  8.999999999999998e-56  Dickeya zeae Ech1591  Bacteria  normal  0.634652  n/a   
 
 
-
 
NC_013421  Pecwa_2199  binding-protein-dependent transport systems inner membrane component  37.63 
 
 
301 aa  218  8.999999999999998e-56  Pectobacterium wasabiae WPP163  Bacteria  normal  0.662638  n/a   
 
 
-
 
NC_012669  Bcav_3791  binding-protein-dependent transport systems inner membrane component  39.86 
 
 
300 aa  218  1e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17142  normal 
 
 
-
 
NC_013526  Tter_2317  binding-protein-dependent transport systems inner membrane component  42.55 
 
 
299 aa  217  2e-55  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2512  binding-protein-dependent transport systems inner membrane component  40.75 
 
 
292 aa  216  2.9999999999999998e-55  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.660216  n/a   
 
 
-
 
NC_012880  Dd703_2035  binding-protein-dependent transport systems inner membrane component  36.77 
 
 
300 aa  215  8e-55  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2216  binding-protein-dependent transport systems inner membrane component  45.17 
 
 
301 aa  215  9e-55  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2820  binding-protein-dependent transport systems inner membrane component  39.45 
 
 
299 aa  211  1e-53  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.0050805  normal 
 
 
-
 
NC_013526  Tter_2522  binding-protein-dependent transport systems inner membrane component  45 
 
 
297 aa  209  3e-53  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000227991  n/a   
 
 
-
 
NC_011899  Hore_20610  binding-protein-dependent transport systems inner membrane component  40 
 
 
273 aa  207  1e-52  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0621  binding-protein-dependent transport systems inner membrane component  35.38 
 
 
289 aa  206  3e-52  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00195134  n/a   
 
 
-
 
NC_009767  Rcas_2544  binding-protein-dependent transport systems inner membrane component  39.04 
 
 
299 aa  205  6e-52  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.238071  normal  0.0688071 
 
 
-
 
NC_009523  RoseRS_3620  binding-protein-dependent transport systems inner membrane component  38.71 
 
 
302 aa  205  8e-52  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0515  binding-protein-dependent transport systems inner membrane component  38.71 
 
 
302 aa  204  1e-51  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2135  binding-protein-dependent transport systems inner membrane component  38.04 
 
 
296 aa  198  1.0000000000000001e-49  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3148  binding-protein-dependent transport systems inner membrane component  39.25 
 
 
311 aa  198  1.0000000000000001e-49  Arthrobacter sp. FB24  Bacteria  decreased coverage  0.00417428  n/a   
 
 
-
 
NC_006274  BCZK1636  sugar ABC transporter, permease  35.9 
 
 
277 aa  197  2.0000000000000003e-49  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1901  sugar ABC transporter, permease protein  35.9 
 
 
277 aa  196  5.000000000000001e-49  Bacillus cereus ATCC 10987  Bacteria  normal  0.682079  n/a   
 
 
-
 
NC_013595  Sros_7693  putative transmembrane permease component of ABC transporter  36.71 
 
 
286 aa  194  1e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.673988 
 
 
-
 
NC_013526  Tter_2452  binding-protein-dependent transport systems inner membrane component  37.67 
 
 
299 aa  194  1e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0352539  n/a   
 
 
-
 
NC_009939  Dgeo_2917  ABC-type sugar transport system, permease component  42.44 
 
 
273 aa  194  1e-48  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_013235  Namu_0512  binding-protein-dependent transport systems inner membrane component  42.05 
 
 
298 aa  193  4e-48  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014213  Mesil_3228  binding-protein-dependent transport systems inner membrane component  40.58 
 
 
272 aa  192  6e-48  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00685083  normal 
 
 
-
 
NC_014213  Mesil_3420  proteophosphoglycan ppg4  40.58 
 
 
272 aa  192  6e-48  Meiothermus silvanus DSM 9946  Bacteria  normal  0.257772  normal 
 
 
-
 
NC_013525  Tter_0124  binding-protein-dependent transport systems inner membrane component  38.95 
 
 
277 aa  191  9e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010003  Pmob_0956  monosaccharide-transporting ATPase  38.57 
 
 
277 aa  191  1e-47  Petrotoga mobilis SJ95  Bacteria  normal  0.0922285  n/a   
 
 
-
 
NC_008699  Noca_0043  binding-protein-dependent transport systems inner membrane component  36.62 
 
 
290 aa  191  2e-47  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_0471  ABC-type sugar transport system permease component-like  40.77 
 
 
276 aa  190  2.9999999999999997e-47  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_1101  binding-protein-dependent transport systems inner membrane component  39.47 
 
 
280 aa  189  4e-47  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1358  binding-protein-dependent transport systems inner membrane component  37.8 
 
 
291 aa  189  5e-47  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_2231  Monosaccharide-transporting ATPase  41.41 
 
 
271 aa  189  5.999999999999999e-47  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_2285  binding-protein-dependent transport systems inner membrane component  41.41 
 
 
271 aa  189  5.999999999999999e-47  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00314445 
 
 
-
 
NC_013521  Sked_21170  carbohydrate ABC transporter membrane protein  41.92 
 
 
302 aa  189  7e-47  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.281989  normal  0.140209 
 
 
-
 
NC_011884  Cyan7425_4398  Monosaccharide-transporting ATPase  40.31 
 
 
281 aa  188  1e-46  Cyanothece sp. PCC 7425  Bacteria  hitchhiker  0.000709548  normal  0.804646 
 
 
-
 
NC_009767  Rcas_3565  binding-protein-dependent transport systems inner membrane component  40 
 
 
291 aa  188  1e-46  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.276199 
 
 
-
 
NC_009616  Tmel_1014  binding-protein-dependent transport systems inner membrane component  36.86 
 
 
273 aa  187  2e-46  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3001  binding-protein-dependent transport systems inner membrane component  39.02 
 
 
308 aa  186  3e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2507  binding-protein-dependent transport systems inner membrane component  40.35 
 
 
296 aa  186  3e-46  Thermobaculum terrenum ATCC BAA-798  Bacteria  decreased coverage  0.00000371485  n/a   
 
 
-
 
NC_007413  Ava_2094  binding-protein dependent transport system inner membrane protein  35.36 
 
 
279 aa  186  4e-46  Anabaena variabilis ATCC 29413  Bacteria  normal  0.179988  hitchhiker  0.00000184258 
 
 
-
 
NC_014212  Mesil_2464  binding-protein-dependent transport systems inner membrane component  40.58 
 
 
270 aa  186  4e-46  Meiothermus silvanus DSM 9946  Bacteria  normal  0.668515  normal  0.267306 
 
 
-
 
NC_013517  Sterm_0717  binding-protein-dependent transport systems inner membrane component  37.59 
 
 
279 aa  184  1.0000000000000001e-45  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0185  binding-protein-dependent transport systems inner membrane component  37.09 
 
 
301 aa  182  5.0000000000000004e-45  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_1470  binding-protein-dependent transport systems inner membrane component  36.64 
 
 
305 aa  182  5.0000000000000004e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3574  Monosaccharide-transporting ATPase  41.15 
 
 
290 aa  182  5.0000000000000004e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.156852  normal 
 
 
-
 
NC_011831  Cagg_0727  binding-protein-dependent transport systems inner membrane component  38.99 
 
 
279 aa  181  1e-44  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000188602  normal 
 
 
-
 
NC_010571  Oter_1750  binding-protein-dependent transport systems inner membrane component  42.52 
 
 
381 aa  181  1e-44  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_3424  binding-protein-dependent transporter inner membrane protein  35.97 
 
 
277 aa  181  2e-44  'Nostoc azollae' 0708  Bacteria  normal  0.224569  n/a   
 
 
-
 
NC_012669  Bcav_4196  binding-protein-dependent transport systems inner membrane component  36.07 
 
 
292 aa  180  2.9999999999999997e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_0749  binding-protein-dependent transport systems inner membrane component  36.27 
 
 
278 aa  179  4e-44  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_3806  binding-protein-dependent transport systems inner membrane component  35.96 
 
 
300 aa  179  4e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4567  binding-protein-dependent transport systems inner membrane component  34.77 
 
 
299 aa  179  4.999999999999999e-44  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1507  binding-protein-dependent transport systems inner membrane component  36.27 
 
 
303 aa  179  4.999999999999999e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.659062  normal 
 
 
-
 
NC_012669  Bcav_0312  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
298 aa  179  4.999999999999999e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1528  binding-protein-dependent transport systems inner membrane component  37.67 
 
 
307 aa  179  4.999999999999999e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.607833  normal  0.154885 
 
 
-
 
NC_013525  Tter_0264  binding-protein-dependent transport systems inner membrane component  34.09 
 
 
307 aa  179  5.999999999999999e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011881  Achl_4623  binding-protein-dependent transport systems inner membrane component  39.08 
 
 
285 aa  178  7e-44  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009767  Rcas_0114  binding-protein-dependent transport systems inner membrane component  35.31 
 
 
299 aa  177  1e-43  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0163331  normal 
 
 
-
 
NC_013946  Mrub_0043  binding-protein-dependent transport systems inner membrane component  41.09 
 
 
270 aa  178  1e-43  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0205  binding-protein-dependent transport systems inner membrane component  38.41 
 
 
279 aa  177  2e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.67338  normal  0.16615 
 
 
-
 
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