Gene Ndas_4908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4908 
Symbol 
ID9248795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp38277 
End bp39176 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content68% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003682797 
Protein GI297563824 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCCA CGACCCTCCC CGACGCCTCC CGGCGGCACC GCCGCCCCAG GGTCCGCCCG 
GCCCGGCTGG TGCTGCACGC CTTCCTCGGC GCCACCGCGC TGGCCTGGTT CTTCCCCATC
CTGTGGGCGC TGGTCAACTC GCTGCGCGAC TACGAGTACA CCGCCCTGCA CGGCTACCTC
TCCCTGGGCG GGTTCACCCT GGACAACTAC GCGCGGGCGT GGAACGAGGG CGAGCTGCCC
GGCTACTTCT GGAACTCGCT GGTCATCACG GTCCCGGCCG TGCTGCTGAC CCTGTTCCTG
TCCTCCTGCG CGGCCTTCGT GCTCTCCAGC TACTCGCGCG GGTTCAACCT GACGATGCTC
GCCGTGTTCC TGGCCGCGAA CCTGCTCCCG GCCCAGGCGC TGCTCGTCCC GCTGTTCCGG
CTCTACACCT CCATCCCCCT GCCGTACTGG ATCAGCGAGT CCGGCTCCCT CTACGACAGC
CACATCGGCG TGGTCCTCAT CCACACCGCC TTCCAGATCG GGTTCTGCAC GTTCGTGCTG
AGCAACTTCA TGAAGGCCAT GCCCGCCTCC CTGTTGGAGG CGGCCAGGGT GGACGGGGCA
TCGGTCTTCC AGCAGTACTG GAGGGTGGTG CTCCCGCTGT GCCGCCCGAG CCTGGCGGCC
CTGGCCACCC TCCTGGTCAC CTGGATCTAC AACGACTTCT TCTGGGCGCT GGCGCTGCTG
TCCAGCGGGG ACAAGCTGCC CATCACCACC GCGCTCCAGA ACCTCCAGAG CGCCTTCTTC
GTCGACTACA ACCTGCTCTC GGCCGGGTCG GTCATCGTCG CCCTGCCCAC GCTCGTCGTG
TTCTTCGCGC TGCAACGCCA CTTCGTCGCC GGACTCACCC TGGGAGCGAG CAAGGGTTGA
 
Protein sequence
MTATTLPDAS RRHRRPRVRP ARLVLHAFLG ATALAWFFPI LWALVNSLRD YEYTALHGYL 
SLGGFTLDNY ARAWNEGELP GYFWNSLVIT VPAVLLTLFL SSCAAFVLSS YSRGFNLTML
AVFLAANLLP AQALLVPLFR LYTSIPLPYW ISESGSLYDS HIGVVLIHTA FQIGFCTFVL
SNFMKAMPAS LLEAARVDGA SVFQQYWRVV LPLCRPSLAA LATLLVTWIY NDFFWALALL
SSGDKLPITT ALQNLQSAFF VDYNLLSAGS VIVALPTLVV FFALQRHFVA GLTLGASKG