More than 300 homologs were found in PanDaTox collection
for query gene Ccel_1000 on replicon NC_011898
Organism: Clostridium cellulolyticum H10



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011898  Ccel_1000  binding-protein-dependent transport systems inner membrane component  100 
 
 
279 aa  566  1e-160  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0202  binding-protein-dependent transport systems inner membrane component  38.06 
 
 
284 aa  215  5.9999999999999996e-55  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0623  binding-protein-dependent transport systems inner membrane component  40 
 
 
285 aa  202  4e-51  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.587185  n/a   
 
 
-
 
NC_013411  GYMC61_2714  binding-protein-dependent transport systems inner membrane component  35.25 
 
 
288 aa  182  8.000000000000001e-45  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_1531  binding-protein-dependent transport systems inner membrane component  35.56 
 
 
275 aa  180  2.9999999999999997e-44  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_23830  ABC-type sugar transport system, permease component  33.82 
 
 
303 aa  170  2e-41  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2308  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
283 aa  167  1e-40  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000390677  n/a   
 
 
-
 
NC_011899  Hore_13120  binding-protein-dependent transport systems inner membrane component  31.5 
 
 
281 aa  165  6.9999999999999995e-40  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008010  Dgeo_2694  binding-protein-dependent transport systems inner membrane component  37.05 
 
 
279 aa  163  3e-39  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_4664  binding-protein-dependent transport systems inner membrane component  35.63 
 
 
294 aa  162  4.0000000000000004e-39  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.829969 
 
 
-
 
NC_012848  Rleg_4749  binding-protein-dependent transport systems inner membrane component  35.25 
 
 
294 aa  159  6e-38  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.377096 
 
 
-
 
NC_008243  Meso_4515  binding-protein-dependent transport systems inner membrane component  35.63 
 
 
275 aa  158  8e-38  Chelativorans sp. BNC1  Bacteria  normal  0.275064  n/a   
 
 
-
 
NC_010320  Teth514_1117  binding-protein-dependent transport systems inner membrane component  33.73 
 
 
275 aa  156  3e-37  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3994  binding-protein-dependent transport systems inner membrane component  34.05 
 
 
303 aa  157  3e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.947348 
 
 
-
 
NC_008541  Arth_3685  binding-protein-dependent transport systems inner membrane component  34.48 
 
 
299 aa  154  2e-36  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3649  binding-protein-dependent transport systems inner membrane component  32.55 
 
 
281 aa  152  8e-36  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.0384109 
 
 
-
 
NC_007488  RSP_3943  ABC sugar transporter, inner membrane subunit  32.16 
 
 
281 aa  151  1e-35  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0114669  n/a   
 
 
-
 
NC_013595  Sros_0294  ABC sugar transporter, inner membrane subunit  31.6 
 
 
278 aa  151  1e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0809  binding-protein-dependent transport systems inner membrane component  32.97 
 
 
281 aa  150  2e-35  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_03310  binding-protein-dependent transport systems inner membrane component  31.94 
 
 
288 aa  150  2e-35  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_1128  binding-protein-dependent transport systems inner membrane component  34.4 
 
 
293 aa  150  3e-35  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0624061  hitchhiker  0.00160002 
 
 
-
 
NC_013441  Gbro_1868  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
276 aa  150  3e-35  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1687  binding-protein-dependent transport systems inner membrane component  31.46 
 
 
282 aa  150  3e-35  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.437147  normal 
 
 
-
 
NC_009921  Franean1_4615  binding-protein-dependent transport systems inner membrane component  32.58 
 
 
295 aa  149  5e-35  Frankia sp. EAN1pec  Bacteria  normal  0.60944  normal 
 
 
-
 
NC_009654  Mmwyl1_2764  binding-protein-dependent transport systems inner membrane component  30.95 
 
 
275 aa  149  5e-35  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0307  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
274 aa  149  6e-35  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_1868  binding-protein-dependent transport systems inner membrane component  32.78 
 
 
282 aa  149  6e-35  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.766168 
 
 
-
 
NC_010320  Teth514_0395  binding-protein-dependent transport systems inner membrane component  32.14 
 
 
277 aa  148  8e-35  Thermoanaerobacter sp. X514  Bacteria  normal  0.230637  n/a   
 
 
-
 
NC_013946  Mrub_2088  binding-protein-dependent transport systems inner membrane component  33.46 
 
 
282 aa  148  9e-35  Meiothermus ruber DSM 1279  Bacteria  hitchhiker  0.00655693  normal  0.897951 
 
 
-
 
NC_008261  CPF_1115  sugar ABC transporter, permease protein  30.3 
 
 
285 aa  147  2.0000000000000003e-34  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0469179  n/a   
 
 
-
 
NC_008686  Pden_2470  binding-protein-dependent transport systems inner membrane component  32.03 
 
 
279 aa  147  2.0000000000000003e-34  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.217565 
 
 
-
 
NC_010001  Cphy_3407  binding-protein-dependent transport systems inner membrane component  32.06 
 
 
281 aa  147  2.0000000000000003e-34  Clostridium phytofermentans ISDg  Bacteria  normal  0.0224694  n/a   
 
 
-
 
NC_012792  Vapar_6267  binding-protein-dependent transport systems inner membrane component  32.96 
 
 
296 aa  146  3e-34  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1043  binding-protein-dependent transport systems inner membrane component  32.81 
 
 
273 aa  146  3e-34  Stackebrandtia nassauensis DSM 44728  Bacteria  decreased coverage  0.00118636  normal  0.712976 
 
 
-
 
NC_009485  BBta_3987  putative sugar ABC transporter (permease protein)  34.52 
 
 
282 aa  146  3e-34  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2536  binding-protein-dependent transport systems inner membrane component  29.74 
 
 
306 aa  146  3e-34  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.250656  n/a   
 
 
-
 
NC_013525  Tter_1289  binding-protein-dependent transport systems inner membrane component  33.88 
 
 
271 aa  145  5e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007802  Jann_1354  binding-protein-dependent transport systems inner membrane component  30.6 
 
 
279 aa  145  7.0000000000000006e-34  Jannaschia sp. CCS1  Bacteria  normal  0.0981879  normal 
 
 
-
 
NC_009636  Smed_2948  binding-protein-dependent transport systems inner membrane component  32.23 
 
 
282 aa  145  7.0000000000000006e-34  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2657  binding-protein-dependent transport systems inner membrane component  34.17 
 
 
283 aa  145  1e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_06510  carbohydrate ABC transporter membrane protein  33.59 
 
 
282 aa  144  1e-33  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1507  binding-protein-dependent transport systems inner membrane component  31.39 
 
 
303 aa  144  1e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.659062  normal 
 
 
-
 
NC_013595  Sros_7693  putative transmembrane permease component of ABC transporter  29.74 
 
 
286 aa  143  2e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.673988 
 
 
-
 
NC_011884  Cyan7425_4081  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
275 aa  144  2e-33  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3817  binding-protein-dependent transport systems inner membrane component  32.42 
 
 
283 aa  142  4e-33  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0519  sugar ABC transporter, permease protein  30.6 
 
 
279 aa  142  5e-33  Brucella suis 1330  Bacteria  normal  0.633758  n/a   
 
 
-
 
NC_012669  Bcav_2717  binding-protein-dependent transport systems inner membrane component  32.39 
 
 
276 aa  142  6e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.621344  normal  0.190746 
 
 
-
 
NC_013521  Sked_11560  carbohydrate ABC transporter membrane protein  34.13 
 
 
301 aa  142  7e-33  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.626059  hitchhiker  0.00742077 
 
 
-
 
NC_013131  Caci_4318  binding-protein-dependent transport systems inner membrane component  29.1 
 
 
295 aa  141  9e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.574995  hitchhiker  0.00173435 
 
 
-
 
NC_011886  Achl_0497  binding-protein-dependent transport systems inner membrane component  30.15 
 
 
306 aa  141  9.999999999999999e-33  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000825086 
 
 
-
 
NC_014165  Tbis_3249  binding-protein-dependent transporter inner membrane component  31.99 
 
 
284 aa  141  9.999999999999999e-33  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_0625  binding-protein-dependent transport systems inner membrane component  33.85 
 
 
298 aa  141  9.999999999999999e-33  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009616  Tmel_1818  binding-protein-dependent transport systems inner membrane component  31.54 
 
 
279 aa  141  9.999999999999999e-33  Thermosipho melanesiensis BI429  Bacteria  normal  0.675174  n/a   
 
 
-
 
NC_014158  Tpau_1201  binding-protein-dependent transport systems inner membrane component  35.16 
 
 
277 aa  140  1.9999999999999998e-32  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2957  binding-protein-dependent transport systems inner membrane component  33.86 
 
 
275 aa  140  1.9999999999999998e-32  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010003  Pmob_0029  binding-protein-dependent transport systems inner membrane component  32.85 
 
 
283 aa  140  1.9999999999999998e-32  Petrotoga mobilis SJ95  Bacteria  unclonable  0.0000000511748  n/a   
 
 
-
 
NC_008043  TM1040_3155  binding-protein-dependent transport systems inner membrane component  29.54 
 
 
279 aa  141  1.9999999999999998e-32  Ruegeria sp. TM1040  Bacteria  normal  0.358123  normal 
 
 
-
 
NC_013171  Apre_1668  binding-protein-dependent transport systems inner membrane component  29.75 
 
 
284 aa  140  1.9999999999999998e-32  Anaerococcus prevotii DSM 20548  Bacteria  normal  0.771633  n/a   
 
 
-
 
NC_009636  Smed_2313  binding-protein-dependent transport systems inner membrane component  31.85 
 
 
280 aa  140  1.9999999999999998e-32  Sinorhizobium medicae WSM419  Bacteria  normal  0.0326071  normal  0.242877 
 
 
-
 
NC_009667  Oant_0352  binding-protein-dependent transport systems inner membrane component  31.52 
 
 
277 aa  140  1.9999999999999998e-32  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3548  binding-protein-dependent transport systems inner membrane component  30.25 
 
 
279 aa  140  1.9999999999999998e-32  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.175971  n/a   
 
 
-
 
NC_010483  TRQ2_0972  binding-protein-dependent transport systems inner membrane component  32.48 
 
 
278 aa  140  3e-32  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00136246  n/a   
 
 
-
 
NC_012848  Rleg_4709  binding-protein-dependent transport systems inner membrane component  31.18 
 
 
278 aa  140  3e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009486  Tpet_0956  binding-protein-dependent transport systems inner membrane component  32.48 
 
 
278 aa  140  3e-32  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0452  sugar ABC transporter, permease protein  30.25 
 
 
279 aa  140  3e-32  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_19780  binding-protein-dependent transport systems inner membrane component  32.16 
 
 
253 aa  140  3e-32  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_3474  binding-protein-dependent transport systems inner membrane component  29.32 
 
 
280 aa  140  3e-32  Actinosynnema mirum DSM 43827  Bacteria  normal  0.183676  n/a   
 
 
-
 
NC_013411  GYMC61_1729  binding-protein-dependent transport systems inner membrane component  31.92 
 
 
275 aa  139  3.9999999999999997e-32  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011899  Hore_20610  binding-protein-dependent transport systems inner membrane component  32.68 
 
 
273 aa  139  3.9999999999999997e-32  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0946  binding-protein-dependent transport systems inner membrane component  32.49 
 
 
281 aa  139  3.9999999999999997e-32  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2049  sugar ABC transporter (permease)  32.14 
 
 
303 aa  139  4.999999999999999e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  0.907779  normal 
 
 
-
 
NC_013946  Mrub_2457  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
275 aa  139  6e-32  Meiothermus ruber DSM 1279  Bacteria  normal  0.741227  normal  0.869108 
 
 
-
 
NC_012853  Rleg_5696  binding-protein-dependent transport systems inner membrane component  33.86 
 
 
283 aa  139  6e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.697019  normal  0.0828938 
 
 
-
 
NC_010001  Cphy_0594  binding-protein-dependent transport systems inner membrane component  29.55 
 
 
293 aa  139  6e-32  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.0000740706  n/a   
 
 
-
 
NC_008541  Arth_0415  binding-protein-dependent transport systems inner membrane component  32.4 
 
 
298 aa  139  7e-32  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1027  binding-protein-dependent transport systems inner membrane component  31.41 
 
 
279 aa  139  7e-32  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.006727  n/a   
 
 
-
 
NC_012669  Bcav_0802  binding-protein-dependent transport systems inner membrane component  31.43 
 
 
286 aa  139  7e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.0123708 
 
 
-
 
NC_007005  Psyr_0760  binding-protein dependent transport system inner membrane protein  32.55 
 
 
280 aa  138  7.999999999999999e-32  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0312496  normal  0.789995 
 
 
-
 
NC_008687  Pden_4440  binding-protein-dependent transport systems inner membrane component  32.5 
 
 
277 aa  138  7.999999999999999e-32  Paracoccus denitrificans PD1222  Bacteria  normal  0.062682  normal 
 
 
-
 
NC_013205  Aaci_2235  binding-protein-dependent transport systems inner membrane component  31.39 
 
 
276 aa  138  7.999999999999999e-32  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_05240  carbohydrate ABC transporter membrane protein  27.37 
 
 
312 aa  138  7.999999999999999e-32  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_3402  binding-protein-dependent transport systems inner membrane component  30.6 
 
 
279 aa  138  7.999999999999999e-32  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_07090  carbohydrate ABC transporter membrane protein  29.45 
 
 
297 aa  138  8.999999999999999e-32  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.484771  normal 
 
 
-
 
NC_013595  Sros_7705  sugar ABC transporter (permease)  32.03 
 
 
301 aa  138  1e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.675914 
 
 
-
 
NC_011145  AnaeK_4265  binding-protein-dependent transport systems inner membrane component  28.08 
 
 
293 aa  138  1e-31  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_1707  binding-protein-dependent transport systems inner membrane component  33.73 
 
 
303 aa  137  1e-31  Arthrobacter sp. FB24  Bacteria  normal  0.384192  n/a   
 
 
-
 
NC_009718  Fnod_0448  binding-protein-dependent transport systems inner membrane component  31.91 
 
 
281 aa  138  1e-31  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0775  binding-protein-dependent transport systems inner membrane component  30.3 
 
 
303 aa  137  1e-31  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2035  binding-protein-dependent transport systems inner membrane component  29.35 
 
 
291 aa  137  2e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0974901  normal  0.381629 
 
 
-
 
NC_008148  Rxyl_0067  binding-protein-dependent transport systems inner membrane component  32.81 
 
 
282 aa  137  2e-31  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_2708  binding-protein-dependent transport systems inner membrane component  30.47 
 
 
279 aa  137  2e-31  Chelativorans sp. BNC1  Bacteria  normal  0.169914  n/a   
 
 
-
 
NC_011891  A2cp1_4287  binding-protein-dependent transport systems inner membrane component  28.08 
 
 
293 aa  137  2e-31  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0088  binding-protein-dependent transport systems inner membrane component  31.47 
 
 
271 aa  137  2e-31  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2010  binding-protein-dependent transport systems inner membrane component  35.17 
 
 
283 aa  137  2e-31  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_20500  Monosaccharide-transporting ATPase  30.35 
 
 
291 aa  137  3.0000000000000003e-31  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00337016  n/a   
 
 
-
 
NC_012669  Bcav_3791  binding-protein-dependent transport systems inner membrane component  29.06 
 
 
300 aa  136  3.0000000000000003e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17142  normal 
 
 
-
 
NC_010001  Cphy_3860  binding-protein-dependent transport systems inner membrane component  31.36 
 
 
291 aa  136  3.0000000000000003e-31  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5740  binding-protein-dependent transport systems inner membrane component  30.58 
 
 
289 aa  136  3.0000000000000003e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.872391  normal  0.176709 
 
 
-
 
NC_012850  Rleg_2904  binding-protein-dependent transport systems inner membrane component  28.83 
 
 
279 aa  136  4e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.239478  normal 
 
 
-
 
NC_011899  Hore_09510  binding-protein-dependent transport systems inner membrane component  30.34 
 
 
290 aa  136  4e-31  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000000548355  n/a   
 
 
-
 
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