Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6026 |
Symbol | |
ID | 6181843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 583267 |
End bp | 584118 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641689156 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001816015 |
Protein GI | 172065303 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.548734 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.778236 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCCGA TGCCCATGTC CCGCTGGGGA CGTCCCGCCC GATGGCTGTA CCGGCTGTCG CTGCCGTGCG CGCTCGCGCT GTGGCTCGTG CCGCTGCTCG CGGTGCTCGT CACGTCGATC CGCTCGACCG ACGAGATCAT GGCCGGTCAC TACTGGGACT GGCCGAAGCA GTTCGCGCTG GTCGAGAACT ACGGCACCGC GCTCACGCAG ACGCCGATGC TGCATTACTT CGCGAACAGC ATCCTGATCA CGGTGCCGTC GGTCGCCGCG TCGATCCTGC TCGCGTCGCT CGCCGGGCAC GCGCTCGCGA ACTACCGGTT CCGCGGCAAT CTCGTGCTGC TCGGGCTGTT CGTCGCGGGC AACTTCGTGC CGATCCAGAT CCTGATGATC CCGGTGCGGC AGATCATGCT CGGCGTCGGC CTGTACAACA CCGTATGGGC GCTGGTGCTG TTCCATACCG CGTTCCAGAC CGGCTTCTGC ACGCTGTTCC TGCGCAACTT CATCCGCGAG CTGCCGTTCG AGCTGATCGA GGCCGCGCGC GTCGAAGGCG CGTCGGAGTG GGCGATCTAC TGGCGCGTCG TGCTGCCGCT CGTACGGCCG GCGCTCGCGG CGCTCGCGAT CCTCGTGTTC ACGTTCGTGT GGAACGACTA CTTCTGGGCG CTGTGCCTCA CGCAAGGCGA CGACGCGGCG CCGATCACCG TCGGCGTCGC CGCGCTCAAG GGGCAGTGGA CGACCGCCTG GAACATCGTG TCGGCCGGCT CGGTGCTCGC CGCGCTGCCG TCGGTGCTGA TGTTCTTCGC GATGCAGAAG CACTTCGTCG CGGGGCTCAC GTTCGGCGCG ACGAAAGGCT GA
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Protein sequence | MYPMPMSRWG RPARWLYRLS LPCALALWLV PLLAVLVTSI RSTDEIMAGH YWDWPKQFAL VENYGTALTQ TPMLHYFANS ILITVPSVAA SILLASLAGH ALANYRFRGN LVLLGLFVAG NFVPIQILMI PVRQIMLGVG LYNTVWALVL FHTAFQTGFC TLFLRNFIRE LPFELIEAAR VEGASEWAIY WRVVLPLVRP ALAALAILVF TFVWNDYFWA LCLTQGDDAA PITVGVAALK GQWTTAWNIV SAGSVLAALP SVLMFFAMQK HFVAGLTFGA TKG
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