| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3485 |
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| Symbol | |
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| ID | 4075125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 516735 |
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| End bp | 517583 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005000 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_611719 |
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| Protein GI | 99078461 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCCGC GTCCGATCGA GAAATCCTCG CCCGCCTGGG CCGCCACCTA TCAGGCCCTG
GTGCCGATGG CGTTGGTTCT GTGGCTTTTG CCGCTGATCG CGGTGGCTGT GTTCTCCATC
AAGCCGGATG TGGATTTCAC CACCGGCAAC TACTGGGGCT GGCCCTCTGC CTTCAAAGGG
TTTGAGAACT ACGGCAAGGT GTTCTTTGCC TCAGACATGC CGCGCTATCT TTTGAATTCG
GTGCTGATCA CGGTGCCGAC GGTGATCGGT GCAGTGGCGC TCTCCTGCAT GACGGGCTTT
GCGCTTGGGG TGTATAAATT CCGGGGCAAC CTCTTGTTGT TCTTCATGTT TGTTGCCGGA
AACTTTGTTC CGTTCCAGAT CCTGATGGTG CCGGTGCGGG ACCTCACCCT GGATATGGGG
CTCTACAATA CCAAACTGGG CCTGGTGCTC TTTCATGTGG CGTTTCAGAC CGGGTTCTGC
ACGCTCTTCA TGCGCAACTT CATTCGGGCG CTCCCGTTCG AGCTGATCGA GGCTGCGCGG
GTGGAGGGCG TCGCAGAATG GCGGATCTTC TGGTTTGTGG TGCTGCCGTT GATGAAGCCC
GCCATTGCGG CGCTGGCGGT GCTGATCTTC ACCTTTATCT GGAATGATTA CTTCTGGGCG
GTGGTCCTGA CCCAAGGGGC CGAAAGCCAG CCGGTGACGG CGGGGATCAC CTCTTTCAAT
GCGCAATATC GCGCGGCCTA CCACCTGATG AGCGCAGGCT CCATCGTGGC GGCGCTGCCG
CCGGTTGCGA TGTTCTTCCT GATGCAGCGG CACTTTATCG CCGGGCTGAC GCTTGGGGCC
GTGAAATGA
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| Protein sequence | MFPRPIEKSS PAWAATYQAL VPMALVLWLL PLIAVAVFSI KPDVDFTTGN YWGWPSAFKG
FENYGKVFFA SDMPRYLLNS VLITVPTVIG AVALSCMTGF ALGVYKFRGN LLLFFMFVAG
NFVPFQILMV PVRDLTLDMG LYNTKLGLVL FHVAFQTGFC TLFMRNFIRA LPFELIEAAR
VEGVAEWRIF WFVVLPLMKP AIAALAVLIF TFIWNDYFWA VVLTQGAESQ PVTAGITSFN
AQYRAAYHLM SAGSIVAALP PVAMFFLMQR HFIAGLTLGA VK
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