Gene Namu_5150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5150 
Symbol 
ID8450781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5738808 
End bp5739749 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content65% 
IMG OID645044184 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003204408 
Protein GI258655252 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGT CAGGCGAGGC CGTCGAGCTG CCGATCCGCA CCGACGCCAC CCCGGAAGAA 
AAGGTCAGCG CCCGCCAGCT CAAGAAGCAG CAGCGACTGG CCGACGCCAA GACCAAACTG
TCCTCGCCCT GGGCGTCGGG CATCGCGATC GTGCTGGCCA TCCTGTGGAC GATCCCCACC
TTCGGCCTGT TCGTCACCTC GTTCCGGCCC AAAGCGGACA TCGACACCTC GGGCTGGTGG
ACGTTCTTCG CCAACCCCGG CATCACCTTC GACAACTACA CCCAGGCGTT CAGCGGCAGC
GGCGGCCTGG GCCCGTTCTT CCTGAACTCG TTCGTCATCG TCTTCCCGGC AGTGATCATC
CCGATCACCC TGGCCCTGCT GGCGGCCTAC GCGTTCGCCT GGATCGAGTT CCCGGGCCGC
GACTTCCTGT TCGTCGCCGT CTTCGCCCTG CAGATCGTGC CGCTGCAGGT GGCCCTGATC
CCGCTGCAGT CCATCTTCGT CAGCGCCGGC CTGCAGAACT CGTTCTGGCC GGTCTGGATC
GCGCACACCA TCTTCGGTCT GCCGCTGGCC ATCTTCATCA TGCACAACTT CATGAAGGAG
ATTCCGGCGT CGATCATCGA GGCGGCCCGG GTCGACGGCG CCGGACACGT GAAGATCTTC
TTCGTCGTGC TCATGCCGTT GCTCGTCCCG GCCATCGCGG CGTTCGGCAT CTTCCAGTTC
CTATGGGTCT GGAACGACCT GCTGGTCGCG CTCGTCTTCG CCCCCAGCCC CAACCTGACC
CCGGTCACCG CAGCCATCGC CGGCCTGTCC GGCACCCGCG GCCAGGACTG GCAACTGCTC
TCCGCAGGTG CGTTCATCGC GATCATCGTG CCGCTGGTGG TCTTCCTATC CCTGCAACGA
TTCTTCGTCC GAGGTCTGTT GGCCGGTGGA GTCAAGGGCT GA
 
Protein sequence
MSMSGEAVEL PIRTDATPEE KVSARQLKKQ QRLADAKTKL SSPWASGIAI VLAILWTIPT 
FGLFVTSFRP KADIDTSGWW TFFANPGITF DNYTQAFSGS GGLGPFFLNS FVIVFPAVII
PITLALLAAY AFAWIEFPGR DFLFVAVFAL QIVPLQVALI PLQSIFVSAG LQNSFWPVWI
AHTIFGLPLA IFIMHNFMKE IPASIIEAAR VDGAGHVKIF FVVLMPLLVP AIAAFGIFQF
LWVWNDLLVA LVFAPSPNLT PVTAAIAGLS GTRGQDWQLL SAGAFIAIIV PLVVFLSLQR
FFVRGLLAGG VKG