| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1590 |
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| Symbol | |
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| ID | 4600554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1541191 |
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| End bp | 1542030 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639774363 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_920988 |
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| Protein GI | 119720493 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0602936 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCGCA GGCTTGCACC CTCAAGGGTA GCCGTAGCGG CGGCCCTCTG GGTCTTCACC
GCGCTATGGC TCCTGCCCTT CGTAGCCCTA GTGGTTATGT CCGTGAAGCC GTACAAGGAG
GTCGTCCTCA ACGGCTGGTG GACGCTACAG GGAAACTACT CCCTCGAAAA CTACGTCGAG
GTACTCCTTA ACCCATCCTT CAACTTCGTC AAGGGCCTTG AGAACTCGTT CGTAGTGGCC
TCTCTGAGCA CAGTGATACC CGTGGTCTTC GCGGCGATGA TGGCATACTC CCTCACGTAC
CTCTCGTTTA GGTACAGAAC TCTGCTCTTC GTCTCGATAC TGGTCTTCAT GTCCGTGCCC
CAGCAAATGG TGGTCATACC GCTGTTCTCG CTCTACGTGA AGACAGGGCT ACACGACAAG
CTTGCAGGCA TAATACTCCT CCACAGCGCG TGGGGAACTC CGTGGATAGC GTTCTTCATG
AGGAATTACT TCAGAATGCT ACCGCAAAGC TTCGTCGAGG CAGCCAGGAT AGACGGGGCA
TCGGAGTTCA CGATCTTCTG GAAAATCCTC CTGCCGCTAA GCCTGCCCGC AGTCGTCGCG
GCCTCCGCGA TACAGTTCAC GTGGGTCTGG GGAGACTTCT TCTACGCGAT GGTGTTCCTC
CCGTCGCCAT CAAACTACGT TGTCACACAA CGCCTAGCGT TGCTAAAAGG CGAGTTCCAC
ATAGACTGGG GCTTGCTGAG TGCCGGCGCT ATACTGGCGA TGCTACCCCC TCTACTGGTC
TACGTCGCGT TCAAGAAGTA CTACGTGAGG GGCTTCGCCG GGTGGGGCGT TAAAGGCTAG
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| Protein sequence | MRRRLAPSRV AVAAALWVFT ALWLLPFVAL VVMSVKPYKE VVLNGWWTLQ GNYSLENYVE
VLLNPSFNFV KGLENSFVVA SLSTVIPVVF AAMMAYSLTY LSFRYRTLLF VSILVFMSVP
QQMVVIPLFS LYVKTGLHDK LAGIILLHSA WGTPWIAFFM RNYFRMLPQS FVEAARIDGA
SEFTIFWKIL LPLSLPAVVA ASAIQFTWVW GDFFYAMVFL PSPSNYVVTQ RLALLKGEFH
IDWGLLSAGA ILAMLPPLLV YVAFKKYYVR GFAGWGVKG
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