| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0801 |
|---|
| Symbol | |
|---|
| ID | 5207744 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 993472 |
|---|
| End bp | 994344 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640594417 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001275165 |
|---|
| Protein GI | 148654960 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.412321 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGTG TTGCCATGCC CGCGCCGAAA CGGCACCACA TTCACTGGTC GCGGATGGTC
GTCTACGGCG TGATGATTAT CTTCCTGTTG TTCTTCCTGT TGCCGGTCTA TCTGCTGCTG
ATTACCAGTT TCAAAAGTTT CGACCAGGTC AGCCTCAGTC GCATGTGGGA GTTGCCGACC
GGCTTCTCGC TGGAGAGTTT CGACCGCGCC TGGAACGGCG GCGAGGGTGT GATTGGGATG
CGCGGGAGTT TCTGGAACAG TGTGCAGCTG GTGGTTCCGG CGACGGTCAT CTCGTGCATC
CTGGGGTCGC TCAATGGGTA TGTCCTGTCG AAATGGCGCT TTCCCGGTTC GGAAACCCTG
TTTACGCTGA TCCTCTTCGG CATGTTCATC CCCTACCAGA GCGTGCTGGT GCCGCTGGTC
GAGGTGTTGC GCGAGATCCG GCTGTATGCC ACCATTCCCG GTCTGATCCT GGTGCACGTG
GTCTACGGCA TTCCGATCAC GACGCTGATC TTCCGGAATT ACTATGCGAC GGTGCCGAAC
GAACTTGTGG AAGCCGGGAA GATCGACGGC GCCGATTTCT TCCATATCTA CCGCCACGTG
ATGCTGCCGC TCTCCGCACC GGGGTTCGTG GTGGTGGCGA TCTGGCAGTT CACCTCGATC
TGGAATGAGT TCCTGTTCGG TCTGATCATC ACCAACGATC CGCAACTGCG CCCGGTGACC
GTTGCGCTGC AAAATCTGTC CGGCAGTCAG TTCACGCAGT GGAATGTGCA GATGGCCGGG
GCGTTGATGG TTGCGTTGCC GCCGCTGCTG GTCTACATTT TCCTTGGAAA GTACTTCCTG
CGCGGCTTGC TGGCGGGGTC GTTGAAGGGG TAA
|
|---|
| Protein sequence | MSSVAMPAPK RHHIHWSRMV VYGVMIIFLL FFLLPVYLLL ITSFKSFDQV SLSRMWELPT
GFSLESFDRA WNGGEGVIGM RGSFWNSVQL VVPATVISCI LGSLNGYVLS KWRFPGSETL
FTLILFGMFI PYQSVLVPLV EVLREIRLYA TIPGLILVHV VYGIPITTLI FRNYYATVPN
ELVEAGKIDG ADFFHIYRHV MLPLSAPGFV VVAIWQFTSI WNEFLFGLII TNDPQLRPVT
VALQNLSGSQ FTQWNVQMAG ALMVALPPLL VYIFLGKYFL RGLLAGSLKG
|
|---|
| |