Gene Ping_2510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2510 
Symbol 
ID4626599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3066896 
End bp3067732 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content41% 
IMG OID639797636 
ProductABC sugar transporter inner membrane binding protein 
Protein accessionYP_943830 
Protein GI119946150 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.686515 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGC GTAATATTCA AACTTTTATT TTGGGCGCTA TGGTTGTATT TGCAGCTCTT 
TGGCTGGTCC CAATGTTGTG GATGTTCTCA CTTTCATTTC AACCAAATGC GCTTTTAGCA
CGCGATACTG CCGATACACT CTTAGGTCTG TTTCCCGCAC AGTTTACTTT GGATAACTAC
ATTCACCTAT TTAGCATGAG TAAAGTGCCG CAATGGTTTT GGAATAGTGT AATTGTGTCC
GGTATGACAA CGATTTTGGT GCTATTAATT TCAAGCATTG CGGGGTTTGC CTTTGCACGT
TTGAATTTCC CCGGGAAAAA AGTGATGTAT CCGCTGGTAC TTGCGGGTCT GATGATTCCA
GAACAAGCGG TCTTTATCCC TTTGTATACC TTCTTTTCTG ATCTGGGTTG GCACAACTCA
TATGCCGGAC TTATTATTCC TCGTTTAAGC CTGCCAATTG GTGTGTTTAT GATGACGCAG
TATTTTAAAG AAGTGCCAAA TGAACTTGAG GAAGCGGCTA AATTAGATGG TGCAAGTATT
CCAAAGCAGT TCCTATATAT CTTCCTGCCA CTTGCCCGTC CAGTGCTTAC GACATTAGGC
ATTATTACTT TTCTATTTTC CTGGAATGAT TATCTATGGC CACTCGTTTC AGCTCAACAA
CCTGAAATGT TTACTATTAC GGTTGGTTTA GCATCAATTC AGGGTAATTT TGCGCAATCA
GAAGGCTTAG GCAGTGTAAT GGCATCGGGG GCATTTGCTT CACTACCGGT TATCATTCTC
TACATTATCT TCCAAAAACA TATTGTAAAA GGGTTCGCCT TAGGCGGAGA AAAATAA
 
Protein sequence
MNTRNIQTFI LGAMVVFAAL WLVPMLWMFS LSFQPNALLA RDTADTLLGL FPAQFTLDNY 
IHLFSMSKVP QWFWNSVIVS GMTTILVLLI SSIAGFAFAR LNFPGKKVMY PLVLAGLMIP
EQAVFIPLYT FFSDLGWHNS YAGLIIPRLS LPIGVFMMTQ YFKEVPNELE EAAKLDGASI
PKQFLYIFLP LARPVLTTLG IITFLFSWND YLWPLVSAQQ PEMFTITVGL ASIQGNFAQS
EGLGSVMASG AFASLPVIIL YIIFQKHIVK GFALGGEK