| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7514 |
|---|
| Symbol | |
|---|
| ID | 8338884 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 8705687 |
|---|
| End bp | 8706520 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644960593 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003118180 |
|---|
| Protein GI | 256396616 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGATCC GTACCAGAGC CGGCGTCTGG CTGCTCTACG CGCTGGTCGC GTTCGTGTTC
GTCTACCCGT TGTGGACGGT CGTGGCGACC GTGTTCTCCA AGCGGCAGGC CAGACTCGGC
GCGATGATGA ACGTCCCGCA CGGGCTCACC GGCGCCAACG TCTCCCAGGC CTGGCACCTC
GGCGTGGCGC GCGGCCTGCT CAACTCGCTG ATCGTGGTCG CCGTCGGGCT GACCCTGCAG
CTGACCGTGT CCTCGCTGGC CGCCTACGCC CTGGCCCGCA AGCGCTTCAA GGGCGCCGGA
GTGGTGATGC TGGCGATCCT GGCCACCATG ATGATGCCCG AGGAGGTGAT CGCGGTCCCG
CTGTTCCAGG TGCTCGGCAA GATCCACCAG CCCTTCACCG GCGGGACGCT GGTCAACTCC
TACGGCGGGC TGATCCTGCC GCTGGTCGGC TGGGCGCTTC CGGTGTACGT GCTGACCGGC
TTCATGAAGC GGGTCCCGCT GGAGCTGGAA GAGGCCGCCC GGATCGACGG CGCCGGCGAC
TTCCGCATCT TCTGGCGCAT CGTGCTGCCG GTGTGCCGGC CGGCGCTGGG CACGTGCGCG
GTGTTCGGGT TCCTGATGAT CTGGGACCAG TACCTGCTGC CGCTGCTGGT GTCGCAGACT
CCGAAGATGG ACACCCTGAC CGTCGTCGTC ACCAGCCTGC AGTCCTCGCA GGAACAGGGC
GAGGGGGTGC GGCTGGCCGC CGTGCTGATC CTCGCGGTGC CCGGCGTGCT GGTCTATCTG
GCCTTGCAGA GACTGTTCGA ACGCGGCCTG CTCAGCGGAT CGCTCAAGGG ATAA
|
|---|
| Protein sequence | MRIRTRAGVW LLYALVAFVF VYPLWTVVAT VFSKRQARLG AMMNVPHGLT GANVSQAWHL
GVARGLLNSL IVVAVGLTLQ LTVSSLAAYA LARKRFKGAG VVMLAILATM MMPEEVIAVP
LFQVLGKIHQ PFTGGTLVNS YGGLILPLVG WALPVYVLTG FMKRVPLELE EAARIDGAGD
FRIFWRIVLP VCRPALGTCA VFGFLMIWDQ YLLPLLVSQT PKMDTLTVVV TSLQSSQEQG
EGVRLAAVLI LAVPGVLVYL ALQRLFERGL LSGSLKG
|
|---|
| |