| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_07090 |
|---|
| Symbol | |
|---|
| ID | 8632346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 813125 |
|---|
| End bp | 814018 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | carbohydrate ABC transporter membrane protein |
|---|
| Protein accession | YP_003313499 |
|---|
| Protein GI | 269794044 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.484771 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTGCTC AGACTCTCGA ACGCACGCCC GTCACCTCCG CGCGCGGGGC CACGAGGAAG
CCGCGGCGCA AGCCTCGCGC CGGACGCATC GCCTCGTACG TCGTCATCGC GGTGCTCGCC
TTCGGCTGGC TCGTGCCGGT CCTGTGGGCC GTGATGACCT CGCTCAAGAC GGAGGCCGAG
GCAGCCGCCG CGCCGATCAC GATCATCCCG GAGAGCGGCT TCACCCTCGA CGCCTACGCC
CGGGTGCTCT CGTCCAGCCA GGTGCCGCGG TGGGCGCTCA ACAGCCTCAT CACCGCCACG
GCCGTCACGC TCATCACCCT GGTCATCAGC GCCCTCGCCG GCTACGCGCT CTCCCGCCTG
GACTTCAAGG GCAAGAAGGT CGCGATGGCC GTCATCATCG GCTCGATCAT GGTGCCCGGG
CAGATCCTCA TCGTGCCGCT GTTCCAGCAG ATGCTCGACT TCAACCTCGT CGACACCTAC
TGGGGCGTGA TCCTGCCGCA GATCGTCGCG GCGCCCATGG TGTTCATCCT CAAGAAGTTC
TTCGACCAGA TCCCCCGCGA GCTCGAGGAG GCCGCCCTCG TCGACGGCGC GAGCCGGCTC
CGGATCCTCC GCCAGATCAT CGTGCCGCTG TCCCGCCCGA TCCTCGCGGC CGTGTCGATC
TTCGTGTTCA TCGGCGCGTG GAACAACTTC CTCTGGCCGT TCATCGTCAT CAACGACTCC
GACCTCATGA CGCTGCCCGT CGGCCTGCAG ACGGTGATCA GCGCCTACGG CATCCAGTAC
GCCCAGAACA TGGCGCAAGC CGTGCTCGCC GCGCTGCCGC TGATCCTCGC GTTCCTGTTC
TTCCAGCGCC AGATCATCAA GGGGATCTCC ACGACCGGCA TCGCCGGCCA GTAG
|
|---|
| Protein sequence | MTAQTLERTP VTSARGATRK PRRKPRAGRI ASYVVIAVLA FGWLVPVLWA VMTSLKTEAE
AAAAPITIIP ESGFTLDAYA RVLSSSQVPR WALNSLITAT AVTLITLVIS ALAGYALSRL
DFKGKKVAMA VIIGSIMVPG QILIVPLFQQ MLDFNLVDTY WGVILPQIVA APMVFILKKF
FDQIPRELEE AALVDGASRL RILRQIIVPL SRPILAAVSI FVFIGAWNNF LWPFIVINDS
DLMTLPVGLQ TVISAYGIQY AQNMAQAVLA ALPLILAFLF FQRQIIKGIS TTGIAGQ
|
|---|
| |