Gene Ping_2009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2009 
Symbol 
ID4627215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2444339 
End bp2445190 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content45% 
IMG OID639797170 
ProductABC sugar transporter inner membrane binding protein 
Protein accessionYP_943372 
Protein GI119945692 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.815195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCCCA AACCAATAAA AAAATCAGGC CGCTTTGCCA ATATAAGCTA CCGCGTTGCC 
CTGCCTATTT CGATTGTACT GTGGTTACTG CCGTTAATTG CCGTAATGAT AACGTCTATT
CGTTCGATAG AAGATATTAA TAAAGGTAAT TACTGGGGTT GGCCGGAGTC GTTTAACTTT
ATTGAAAACT ATACCGAGGT ATTTGTATCC ACTTCGATGG GACAGTATCT GCTTAACAGT
TTGCTTATTA CCTTACCTGC GGTTGCCGGT GCCGTTGCAC TGTCGACATT AGCCGGTTTT
GCACTGGCGA AGTATAACTT TAAAGGCAAT GTTTGGATCT TTGCCGCCTT TATCGGAGGT
AACTTTGTAC CTTTTCAGAT TCTGATGATT CCAGTGCGTG ATTTGACCAT CGACTTAGGG
CTTTACGATA CGCATTGGGC ACTTATTTTT TTCCATATCG CGTTCCAAGC CGGTTTCTGT
ACGCTGTTTA TGCGCAACTT TATTGTTGGT ATTCCAGATG CATTGATTGA AGCTGCGCGG
GTTGAAGGGG TCAGTGAATG GAAAATATTC TGGCACATTG TATTACCCCT GGTGCGTCCC
GCATTAGCGG CACTTGCCGT ACTGGTATTT ACCTTTATTT GGAATGATTT CTTCTGGGCC
TTAGTCTTAG TGCAGAGTGA TGAAGTCCGT CCGGTTACCG CCGGGTTAAG TTCACTGCAG
GGACAGTGGT TATCATCATG GCAGTTTATG TCTGCCGGTG CTGTTGTTGC CGCGGTTCCG
CCCGTGCTCC TGTTCTTTAC CATGCAACGC CATTTTATAA CCGGTTTAAC CTTAGGTGCG
ACAAAAGGAT AA
 
Protein sequence
MFPKPIKKSG RFANISYRVA LPISIVLWLL PLIAVMITSI RSIEDINKGN YWGWPESFNF 
IENYTEVFVS TSMGQYLLNS LLITLPAVAG AVALSTLAGF ALAKYNFKGN VWIFAAFIGG
NFVPFQILMI PVRDLTIDLG LYDTHWALIF FHIAFQAGFC TLFMRNFIVG IPDALIEAAR
VEGVSEWKIF WHIVLPLVRP ALAALAVLVF TFIWNDFFWA LVLVQSDEVR PVTAGLSSLQ
GQWLSSWQFM SAGAVVAAVP PVLLFFTMQR HFITGLTLGA TKG