| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_3180 |
|---|
| Symbol | |
|---|
| ID | 9147096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | - |
|---|
| Start bp | 3534336 |
|---|
| End bp | 3535259 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003638261 |
|---|
| Protein GI | 296131011 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0466415 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG TCAGCACCGA CCTCACGGTG GACACCGGGA GCGGCAAGAA GCTCACGCGG
CTCGAGCGGC GCGCGGTCGA GACGCAGGGG CGGCTGAGCT CGCCCTGGGC GTCGTTCGCG
GCCATCGTCA TCGCCGTCCT GTGGACCGTC CCGACGCTCG GTCTGTTCAT CACGTCGTTC
CGCCCGCAGA AGGACATCGT GTCCTCGGGC TGGTGGCAGT GGTTCACGAG CCCGGGCGCG
ACGCTCGAGA ACTACACCAC CGTGCTCACG GGGTCGTCGA CGAACCTCGC GACGTTCTTC
GTCAACAGCC TCGTCATCAC GGTCCCCGCC GTGCTCATCC CCATCTCCCT GGCTCTCCTG
GCGGCGTACG CGTTCGCGTG GATCCCGTTC CGCGGGCGGG GGCTGCTGTT CGTCGCGGTG
TTCACGCTGC AGGTCGTGCC CATCCAGGTC ACGCTCATCC CGCTGCTGCG CACCTACGTG
GGGTGGGGCC TGGACGGCAC GTTCTGGACC GTGTGGCTCT CGCACTCGAT CTTCGCGCTG
CCGCTGGCGA TCTTCCTGCT GCACAACTTC ATGCGGGACG TGCCGGCGTC GCTCGTGGAG
GCCGCGCGCG TCGACGGCGC CGGGCACGTG CGGATCTTCT TCTCCATCAT GTTCCCGCTG
CTGGTGCCGG CGATCGCGTC CTTCGGGATC TTCCAGTTCC TGTGGGTGTG GAACGACCTG
CTCGTCGCGC TGACGTTCGC GGGCGGCACG CAGGACGTCG CGCCGCTGAC CGTGCGCGTG
GCCGAGCTCG CCGGCACGCG TGGCACCGAG TGGCACCTGC TGAGCGCGGG TGCGTTCGTC
GCGCTCGTCG TGCCGGTCAT CGTGTTCCTG GCGCTGCAGC GGTACTTCGT GCGGGGTCTG
CTCGCGGGGT CGGTCAAGGG CTGA
|
|---|
| Protein sequence | MSAVSTDLTV DTGSGKKLTR LERRAVETQG RLSSPWASFA AIVIAVLWTV PTLGLFITSF
RPQKDIVSSG WWQWFTSPGA TLENYTTVLT GSSTNLATFF VNSLVITVPA VLIPISLALL
AAYAFAWIPF RGRGLLFVAV FTLQVVPIQV TLIPLLRTYV GWGLDGTFWT VWLSHSIFAL
PLAIFLLHNF MRDVPASLVE AARVDGAGHV RIFFSIMFPL LVPAIASFGI FQFLWVWNDL
LVALTFAGGT QDVAPLTVRV AELAGTRGTE WHLLSAGAFV ALVVPVIVFL ALQRYFVRGL
LAGSVKG
|
|---|
| |