113 homologs were found in PanDaTox collection
for query gene TRQ2_1208 on replicon NC_010483
Organism: Thermotoga sp. RQ2



Page 1 of 2    << first  < prev  1  2    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010483  TRQ2_1208  Holliday junction resolvase YqgF  100 
 
 		 206 aa  416  1e-116  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.000404516  n/a   
 
 
-
 
NC_009486  Tpet_1247  Holliday junction resolvase YqgF  96.6 
 
 		 206 aa  401  1e-111  Thermotoga petrophila RKU-1  Bacteria  decreased coverage  0.00416078  n/a   
 
 
-
 
NC_009616  Tmel_0300  Holliday junction resolvase YqgF  34.43 
 
 		 202 aa  108  8.000000000000001e-23  Thermosipho melanesiensis BI429  Bacteria  normal  1  n/a   
 
 
-
 
NC_009718  Fnod_0335  Holliday junction resolvase YqgF  33.33 
 
 		 226 aa  80.9  0.00000000000001  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010003  Pmob_0336  Holliday junction resolvase YqgF  29.57 
 
 		 230 aa  75.1  0.0000000000006  Petrotoga mobilis SJ95  Bacteria  normal  1  n/a   
 
 
-
 
NC_010501  PputW619_0468  Holliday junction resolvase-like protein  27.94 
 
 		 141 aa  63.5  0.000000002  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002947  PP_4996  Holliday junction resolvase-like protein  27.94 
 
 		 141 aa  63.2  0.000000003  Pseudomonas putida KT2440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009512  Pput_4870  Holliday junction resolvase-like protein  27.94 
 
 		 141 aa  63.2  0.000000003  Pseudomonas putida F1  Bacteria  normal  1  normal  0.0143218 
 
 
-
 
NC_010322  PputGB1_5046  Holliday junction resolvase-like protein  27.94 
 
 		 141 aa  63.2  0.000000003  Pseudomonas putida GB-1  Bacteria  normal  0.433304  normal  1 
 
 
-
 
NC_007492  Pfl01_5312  Holliday junction resolvase-like protein  28.57 
 
 		 145 aa  62  0.000000006  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0190801  normal  0.217295 
 
 
-
 
NC_013739  Cwoe_3035  Holliday junction resolvase YqgF  28.8 
 
 		 133 aa  60.8  0.00000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.0101605  normal  0.0662243 
 
 
-
 
NC_004578  PSPTO_5038  hypothetical protein  27.82 
 
 		 146 aa  60.8  0.00000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_0484  Holliday junction resolvase-like protein  27.82 
 
 		 146 aa  60.1  0.00000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009439  Pmen_0399  Holliday junction resolvase-like protein  26.12 
 
 		 144 aa  58.9  0.00000005  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007963  Csal_0059  Holliday junction resolvase-like protein  27.78 
 
 		 148 aa  57.8  0.0000001  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_009092  Shew_1143  Holliday junction resolvase-like protein  33.33 
 
 		 139 aa  55.1  0.0000007  Shewanella loihica PV-4  Bacteria  normal  0.997205  normal  0.0325702 
 
 
-
 
NC_009052  Sbal_3020  Holliday junction resolvase-like protein  29.32 
 
 		 141 aa  54.3  0.000001  Shewanella baltica OS155  Bacteria  hitchhiker  0.00101053  n/a   
 
 
-
 
NC_009665  Shew185_3035  Holliday junction resolvase-like protein  29.32 
 
 		 141 aa  54.3  0.000001  Shewanella baltica OS185  Bacteria  hitchhiker  0.00000814628  n/a   
 
 
-
 
NC_009997  Sbal195_3178  Holliday junction resolvase-like protein  29.32 
 
 		 141 aa  54.3  0.000001  Shewanella baltica OS195  Bacteria  hitchhiker  0.000555794  normal  0.0157194 
 
 
-
 
NC_011663  Sbal223_1343  Holliday junction resolvase-like protein  29.32 
 
 		 141 aa  54.3  0.000001  Shewanella baltica OS223  Bacteria  hitchhiker  0.00897927  hitchhiker  0.00000000052642 
 
 
-
 
NC_004347  SO_3347  Holliday junction resolvase-like protein  30.3 
 
 		 141 aa  53.5  0.000002  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008346  Swol_0470  Holliday junction resolvase YqgF  28.15 
 
 		 141 aa  53.5  0.000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.00000000599692  n/a   
 
 
-
 
NC_002950  PG2202  Holliday junction resolvase-like protein  27.82 
 
 		 138 aa  52.8  0.000003  Porphyromonas gingivalis W83  Bacteria  n/a    normal  1 
 
 
-
 
NC_007651  BTH_I1463  Holliday junction resolvase-like protein  27.56 
 
 		 146 aa  53.1  0.000003  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_1198  Holliday junction resolvase-like protein  31.06 
 
 		 141 aa  53.1  0.000003  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000276178  normal  1 
 
 
-
 
NC_008322  Shewmr7_1269  Holliday junction resolvase-like protein  31.06 
 
 		 141 aa  53.1  0.000003  Shewanella sp. MR-7  Bacteria  hitchhiker  0.000329275  normal  1 
 
 
-
 
NC_008345  Sfri_2849  Holliday junction resolvase-like protein  28.79 
 
 		 139 aa  52.8  0.000003  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_1199  Holliday junction resolvase-like protein  31.06 
 
 		 141 aa  53.1  0.000003  Shewanella sp. ANA-3  Bacteria  normal  0.0107111  normal  0.529497 
 
 
-
 
NC_009438  Sputcn32_2682  Holliday junction resolvase-like protein  29.55 
 
 		 141 aa  52.8  0.000003  Shewanella putrefaciens CN-32  Bacteria  normal  0.0331396  n/a   
 
 
-
 
NC_008700  Sama_2473  Holliday junction resolvase-like protein  30.3 
 
 		 139 aa  52.8  0.000004  Shewanella amazonensis SB2B  Bacteria  normal  0.641283  normal  1 
 
 
-
 
NC_009831  Ssed_1236  Holliday junction resolvase-like protein  29.55 
 
 		 139 aa  52.8  0.000004  Shewanella sediminis HAW-EB3  Bacteria  normal  0.578906  normal  0.405452 
 
 
-
 
NC_007954  Sden_2673  Holliday junction resolvase-like protein  31.06 
 
 		 141 aa  52.4  0.000005  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000201914  n/a   
 
 
-
 
NC_008309  HS_0010  Holliday junction resolvase-like protein  27.74 
 
 		 141 aa  52.4  0.000005  Haemophilus somnus 129PT  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_3713  Holliday junction resolvase YqgF  28.47 
 
 		 146 aa  52.4  0.000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0658941  hitchhiker  0.00476179 
 
 
-
 
NC_002620  TC0456  Holliday junction resolvase-like protein  27.61 
 
 		 148 aa  52  0.000006  Chlamydia muridarum Nigg  Bacteria  normal  0.0531997  n/a   
 
 
-
 
NC_003910  CPS_1251  Holliday junction resolvase-like protein  28.03 
 
 		 148 aa  50.8  0.00001  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_008009  Acid345_0556  Holliday junction resolvase YqgF  31.11 
 
 		 153 aa  51.2  0.00001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.901255  normal  0.0480752 
 
 
-
 
NC_008709  Ping_1285  Holliday junction resolvase YqgF  30.3 
 
 		 145 aa  51.2  0.00001  Psychromonas ingrahamii 37  Bacteria  normal  0.0394867  normal  1 
 
 
-
 
NC_006348  BMA1996  Holliday junction resolvase-like protein  28.91 
 
 		 146 aa  50.4  0.00002  Burkholderia mallei ATCC 23344  Bacteria  normal  0.391575  n/a   
 
 
-
 
NC_007434  BURPS1710b_3169  Holliday junction resolvase-like protein  28.91 
 
 		 146 aa  50.4  0.00002  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_05280  Holliday junction resolvase-like protein  27.1 
 
 		 144 aa  50.1  0.00002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008785  BMASAVP1_A0917  Holliday junction resolvase-like protein  28.91 
 
 		 146 aa  50.4  0.00002  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008836  BMA10229_A2747  Holliday junction resolvase-like protein  28.91 
 
 		 146 aa  50.4  0.00002  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009074  BURPS668_3111  Holliday junction resolvase-like protein  28.91 
 
 		 146 aa  50.4  0.00002  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_009076  BURPS1106A_3147  Holliday junction resolvase-like protein  28.91 
 
 		 146 aa  50.4  0.00002  Burkholderia pseudomallei 1106a  Bacteria  normal  0.822464  n/a   
 
 
-
 
NC_009080  BMA10247_1858  Holliday junction resolvase-like protein  28.91 
 
 		 146 aa  50.4  0.00002  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009379  Pnuc_0244  Holliday junction resolvase-like protein  28.57 
 
 		 138 aa  50.4  0.00002  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.535412  n/a   
 
 
-
 
NC_009656  PSPA7_0504  Holliday junction resolvase-like protein  27.1 
 
 		 144 aa  50.1  0.00002  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_009801  EcE24377A_3292  Holliday junction resolvase-like protein  29.32 
 
 		 138 aa  50.1  0.00002  Escherichia coli E24377A  Bacteria  normal  0.684819  n/a   
 
 
-
 
NC_009901  Spea_1131  Holliday junction resolvase-like protein  31.82 
 
 		 141 aa  50.4  0.00002  Shewanella pealeana ATCC 700345  Bacteria  normal  0.111461  n/a   
 
 
-
 
NC_010498  EcSMS35_3091  Holliday junction resolvase-like protein  29.32 
 
 		 138 aa  50.1  0.00002  Escherichia coli SMS-3-5  Bacteria  normal  0.372008  decreased coverage  0.00000514809 
 
 
-
 
NC_010531  Pnec_0265  Holliday junction resolvase-like protein  27.27 
 
 		 147 aa  50.4  0.00002  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010658  SbBS512_E3381  Holliday junction resolvase-like protein  29.32 
 
 		 138 aa  50.1  0.00002  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
NC_011353  ECH74115_4252  Holliday junction resolvase-like protein  29.32 
 
 		 138 aa  50.1  0.00002  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.367892  normal  0.370097 
 
 
-
 
CP001509  ECD_02779  Holliday junction resolvase-like protein  27.27 
 
 		 138 aa  49.7  0.00003  Escherichia coli BL21(DE3)  Bacteria  normal  0.358182  n/a   
 
 
-
 
CP001637  EcDH1_0746  Holliday junction resolvase YqgF  27.07 
 
 		 138 aa  49.7  0.00003  Escherichia coli DH1  Bacteria  normal  0.61838  n/a   
 
 
-
 
NC_013889  TK90_2407  Holliday junction resolvase YqgF  25.78 
 
 		 130 aa  49.7  0.00003  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.664688  normal  0.90932 
 
 
-
 
NC_008228  Patl_1154  Holliday junction resolvase YqgF  30.83 
 
 		 143 aa  49.7  0.00003  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_3225  Holliday junction resolvase YqgF  26.81 
 
 		 141 aa  49.7  0.00003  Roseiflexus sp. RS-1  Bacteria  normal  0.387387  normal  1 
 
 
-
 
NC_009800  EcHS_A3107  Holliday junction resolvase-like protein  27.07 
 
 		 138 aa  49.7  0.00003  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_010468  EcolC_0765  Holliday junction resolvase-like protein  27.07 
 
 		 138 aa  49.7  0.00003  Escherichia coli ATCC 8739  Bacteria  normal  0.809741  hitchhiker  0.0000191582 
 
 
-
 
NC_012892  B21_02742  hypothetical protein  27.27 
 
 		 138 aa  49.7  0.00003  Escherichia coli BL21  Bacteria  normal  0.395069  n/a   
 
 
-
 
NC_007204  Psyc_0056  hypothetical protein  27.89 
 
 		 177 aa  49.3  0.00004  Psychrobacter arcticus 273-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011126  HY04AAS1_0205  Holliday junction resolvase YqgF  31.2 
 
 		 123 aa  48.9  0.00005  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013946  Mrub_2951  Holliday junction resolvase YqgF  31.31 
 
 		 136 aa  48.9  0.00006  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011080  SNSL254_A3344  Holliday junction resolvase-like protein  27.07 
 
 		 138 aa  48.5  0.00007  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.130119  normal  0.247443 
 
 
-
 
NC_011083  SeHA_C3336  Holliday junction resolvase-like protein  27.07 
 
 		 138 aa  48.5  0.00007  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  0.392173 
 
 
-
 
NC_011094  SeSA_A3271  Holliday junction resolvase-like protein  27.07 
 
 		 138 aa  48.5  0.00007  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  0.0744312 
 
 
-
 
NC_011149  SeAg_B3260  Holliday junction resolvase-like protein  27.07 
 
 		 138 aa  48.5  0.00007  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.254908  n/a   
 
 
-
 
NC_011205  SeD_A3440  Holliday junction resolvase-like protein  27.07 
 
 		 138 aa  48.5  0.00007  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  hitchhiker  0.00956364 
 
 
-
 
NC_014150  Bmur_2800  Holliday junction resolvase YqgF  30.23 
 
 		 141 aa  48.1  0.0001  Brachyspira murdochii DSM 12563  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_1336  Holliday junction resolvase-like protein  30.3 
 
 		 139 aa  47.8  0.0001  Shewanella woodyi ATCC 51908  Bacteria  normal  0.164432  hitchhiker  0.000378103 
 
 
-
 
NC_011138  MADE_03294  Holliday junction resolvase-like protein  26.52 
 
 		 143 aa  47.8  0.0001  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.659098  n/a   
 
 
-
 
NC_012560  Avin_03140  Holliday junction resolvase-like protein  25.77 
 
 		 142 aa  48.1  0.0001  Azotobacter vinelandii DJ  Bacteria  normal  0.567501  n/a   
 
 
-
 
NC_012880  Dd703_0543  Holliday junction resolvase-like protein  31.88 
 
 		 139 aa  47.8  0.0001  Dickeya dadantii Ech703  Bacteria  normal  0.0491649  n/a   
 
 
-
 
NC_013037  Dfer_4051  Holliday junction resolvase YqgF  25 
 
 		 137 aa  47.4  0.0002  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  hitchhiker  0.00000789262 
 
 
-
 
NC_007298  Daro_3892  Holliday junction resolvase-like protein  25 
 
 		 146 aa  46.6  0.0003  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007969  Pcryo_0061  Holliday junction resolvase YqgF  25.53 
 
 		 173 aa  46.6  0.0003  Psychrobacter cryohalolentis K5  Bacteria  normal  1  normal  0.498043 
 
 
-
 
NC_011661  Dtur_1024  Holliday junction resolvase YqgF  27.34 
 
 		 141 aa  46.2  0.0003  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
-
 
NC_012912  Dd1591_0500  Holliday junction resolvase-like protein  33.09 
 
 		 143 aa  46.6  0.0003  Dickeya zeae Ech1591  Bacteria  normal  0.23587  n/a   
 
 
-
 
NC_007614  Nmul_A2479  Holliday junction resolvase-like protein  25.93 
 
 		 151 aa  45.8  0.0004  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_007912  Sde_3638  Holliday junction resolvase-like protein  21.54 
 
 		 142 aa  45.8  0.0004  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013205  Aaci_2024  Holliday junction resolvase YqgF  29.52 
 
 		 144 aa  46.2  0.0004  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.330713  n/a   
 
 
-
 
NC_007347  Reut_A0706  Holliday junction resolvase-like protein  27.78 
 
 		 141 aa  45.8  0.0005  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_009708  YpsIP31758_0834  Holliday junction resolvase-like protein  23.88 
 
 		 140 aa  45.4  0.0006  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_010159  YpAngola_A3340  Holliday junction resolvase-like protein  23.88 
 
 		 140 aa  45.4  0.0006  Yersinia pestis Angola  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010465  YPK_0836  Holliday junction resolvase-like protein  23.88 
 
 		 140 aa  45.4  0.0006  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.0695104  n/a   
 
 
-
 
NC_007973  Rmet_2742  Holliday junction resolvase-like protein  25.2 
 
 		 149 aa  45.1  0.0008  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009832  Spro_4028  Holliday junction resolvase-like protein  25.19 
 
 		 140 aa  45.1  0.0008  Serratia proteamaculans 568  Bacteria  normal  0.290268  hitchhiker  0.00115108 
 
 
-
 
NC_011901  Tgr7_2911  Holliday junction resolvase YqgF  24.81 
 
 		 163 aa  45.1  0.0008  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.816073  n/a   
 
 
-
 
NC_007644  Moth_1640  Holliday junction resolvase YqgF  26.72 
 
 		 140 aa  44.7  0.001  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.278901  normal  0.163549 
 
 
-
 
NC_008527  LACR_0138  Holliday junction resolvase-like protein  24.82 
 
 		 143 aa  44.3  0.001  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  1  n/a   
 
 
-
 
NC_009524  PsycPRwf_0143  Holliday junction resolvase YqgF  24.66 
 
 		 177 aa  44.7  0.001  Psychrobacter sp. PRwf-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010622  Bphy_2326  Holliday junction resolvase-like protein  24.43 
 
 		 151 aa  43.9  0.002  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.0635951 
 
 
-
 
NC_011898  Ccel_2239  Holliday junction resolvase-like protein  28.03 
 
 		 142 aa  43.9  0.002  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.0000140275  n/a   
 
 
-
 
NC_011899  Hore_05800  Holliday junction resolvase YqgF  31.54 
 
 		 140 aa  43.9  0.002  Halothermothrix orenii H 168  Bacteria  normal  0.209228  n/a   
 
 
-
 
NC_013173  Dbac_1790  Holliday junction resolvase YqgF  27.48 
 
 		 133 aa  43.1  0.003  Desulfomicrobium baculatum DSM 4028  Bacteria  decreased coverage  0.00751815  n/a   
 
 
-
 
NC_013525  Tter_0088  Holliday junction resolvase YqgF  26.67 
 
 		 149 aa  42.7  0.003  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009436  Ent638_3353  Holliday junction resolvase-like protein  27.82 
 
 		 138 aa  43.1  0.003  Enterobacter sp. 638  Bacteria  normal  0.2584  decreased coverage  0.0020385 
 
 
-
 
NC_010681  Bphyt_0869  Holliday junction resolvase-like protein  26.12 
 
 		 146 aa  43.1  0.003  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  0.0747835 
 
 
-
 
Page 1 of 2    << first  < prev  1  2    next >  last >>