More than 300 homologs were found in PanDaTox collection
for query gene Dfer_4051 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013037  Dfer_4051  Holliday junction resolvase YqgF  100 
 
 
137 aa  280  4.0000000000000003e-75  Dyadobacter fermentans DSM 18053  Bacteria  normal  hitchhiker  0.00000789262 
 
 
-
 
NC_013730  Slin_5430  Holliday junction resolvase YqgF  67.88 
 
 
142 aa  197  6e-50  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_0074  Holliday junction resolvase YqgF  58.39 
 
 
138 aa  167  3e-41  Pedobacter heparinus DSM 2366  Bacteria  normal  0.974882  normal 
 
 
-
 
NC_013162  Coch_1395  Holliday junction resolvase YqgF  58.21 
 
 
143 aa  164  4e-40  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_0692  Holliday junction resolvase-like protein  56.93 
 
 
152 aa  160  4.0000000000000004e-39  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.458381 
 
 
-
 
NC_009441  Fjoh_2528  Holliday junction resolvase-like protein  51.82 
 
 
138 aa  152  1e-36  Flavobacterium johnsoniae UW101  Bacteria  normal  0.551236  n/a   
 
 
-
 
NC_014230  CA2559_06155  Holliday junction resolvase-like protein  54.14 
 
 
135 aa  150  5e-36  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_1903  Holliday junction resolvase YqgF  52.21 
 
 
136 aa  150  5e-36  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_002950  PG2202  Holliday junction resolvase-like protein  51.11 
 
 
138 aa  145  2.0000000000000003e-34  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_010830  Aasi_1327  Holliday junction resolvase-like protein  48.18 
 
 
141 aa  139  1.9999999999999998e-32  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal  0.513618 
 
 
-
 
NC_008639  Cpha266_2570  Holliday junction resolvase YqgF  41.48 
 
 
142 aa  108  2.0000000000000002e-23  Chlorobium phaeobacteroides DSM 266  Bacteria  hitchhiker  0.00347975  n/a   
 
 
-
 
NC_013501  Rmar_0873  Holliday junction resolvase YqgF  35.82 
 
 
145 aa  103  7e-22  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_2429  Holliday junction resolvase YqgF  35.34 
 
 
144 aa  95.5  2e-19  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_007512  Plut_2047  Holliday junction resolvase YqgF  36.3 
 
 
141 aa  90.9  5e-18  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_2406  Holliday junction resolvase YqgF  33.33 
 
 
142 aa  90.9  5e-18  Chlorobium limicola DSM 245  Bacteria  normal  0.406379  n/a   
 
 
-
 
NC_009513  Lreu_0535  Holliday junction resolvase-like protein  35.04 
 
 
147 aa  87.8  5e-17  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000331559  n/a   
 
 
-
 
NC_007514  Cag_0014  Holliday junction resolvase YqgF  31.11 
 
 
140 aa  87  9e-17  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.639301  n/a   
 
 
-
 
NC_009012  Cthe_0153  Holliday junction resolvase-like protein  34.51 
 
 
141 aa  85.9  2e-16  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0185653  n/a   
 
 
-
 
NC_008009  Acid345_0556  Holliday junction resolvase YqgF  37.23 
 
 
153 aa  85.9  2e-16  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.901255  normal  0.0480752 
 
 
-
 
NC_009972  Haur_3633  Holliday junction resolvase YqgF  41.3 
 
 
158 aa  83.6  9e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010655  Amuc_1191  Holliday junction resolvase YqgF  34.59 
 
 
141 aa  82.4  0.000000000000002  Akkermansia muciniphila ATCC BAA-835  Bacteria  hitchhiker  0.0000237997  normal 
 
 
-
 
NC_008530  LGAS_0423  Holliday junction resolvase-like protein  31.94 
 
 
143 aa  80.9  0.000000000000006  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_2162  Holliday junction resolvase YqgF  31.82 
 
 
142 aa  80.5  0.000000000000007  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.337322  normal 
 
 
-
 
NC_013522  Taci_1032  Holliday junction resolvase YqgF  31.16 
 
 
142 aa  79.7  0.00000000000001  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_2805  Holliday junction resolvase YqgF  29.85 
 
 
145 aa  79  0.00000000000002  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0938  Holliday junction resolvase YqgF  31.43 
 
 
139 aa  78.2  0.00000000000003  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_2739  Holliday junction resolvase YqgF  33.1 
 
 
137 aa  76.6  0.00000000000009  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0474  Holliday junction resolvase YqgF  32.86 
 
 
145 aa  77  0.00000000000009  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00800439  n/a   
 
 
-
 
NC_013441  Gbro_2321  Holliday junction resolvase YqgF  35.25 
 
 
143 aa  76.6  0.0000000000001  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_4996  Holliday junction resolvase-like protein  33.33 
 
 
141 aa  75.1  0.0000000000003  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_5046  Holliday junction resolvase-like protein  33.33 
 
 
141 aa  75.1  0.0000000000003  Pseudomonas putida GB-1  Bacteria  normal  0.433304  normal 
 
 
-
 
NC_009512  Pput_4870  Holliday junction resolvase-like protein  33.33 
 
 
141 aa  75.1  0.0000000000003  Pseudomonas putida F1  Bacteria  normal  normal  0.0143218 
 
 
-
 
NC_009523  RoseRS_3225  Holliday junction resolvase YqgF  36.23 
 
 
141 aa  75.5  0.0000000000003  Roseiflexus sp. RS-1  Bacteria  normal  0.387387  normal 
 
 
-
 
NC_010501  PputW619_0468  Holliday junction resolvase-like protein  33.33 
 
 
141 aa  74.3  0.0000000000005  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_05800  Holliday junction resolvase YqgF  32.59 
 
 
140 aa  74.3  0.0000000000005  Halothermothrix orenii H 168  Bacteria  normal  0.209228  n/a   
 
 
-
 
NC_011661  Dtur_1024  Holliday junction resolvase YqgF  34.56 
 
 
141 aa  73.9  0.0000000000006  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3713  Holliday junction resolvase YqgF  35.51 
 
 
146 aa  73.9  0.0000000000006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0658941  hitchhiker  0.00476179 
 
 
-
 
NC_011729  PCC7424_3098  Holliday junction resolvase-like protein  35.29 
 
 
151 aa  73.6  0.0000000000008  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_004578  PSPTO_5038  hypothetical protein  34.33 
 
 
146 aa  72.8  0.000000000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_2514  Holliday junction resolvase-like protein  36.03 
 
 
150 aa  73.2  0.000000000001  Cyanothece sp. PCC 7425  Bacteria  normal  0.36708  normal 
 
 
-
 
NC_007644  Moth_1640  Holliday junction resolvase YqgF  34.81 
 
 
140 aa  73.2  0.000000000001  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.278901  normal  0.163549 
 
 
-
 
NC_008532  STER_1938  Holliday junction resolvase-like protein  29.08 
 
 
139 aa  73.2  0.000000000001  Streptococcus thermophilus LMD-9  Bacteria  unclonable  0.0000000471473  n/a   
 
 
-
 
NC_007413  Ava_3804  Holliday junction resolvase-like protein  35 
 
 
151 aa  72.8  0.000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0796335  normal 
 
 
-
 
NC_009338  Mflv_3762  Holliday junction resolvase YqgF  33.57 
 
 
175 aa  71.2  0.000000000004  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.454353 
 
 
-
 
NC_007005  Psyr_0484  Holliday junction resolvase-like protein  33.58 
 
 
146 aa  71.2  0.000000000004  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_3157  Holliday junction resolvase YqgF  30.15 
 
 
222 aa  71.2  0.000000000004  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.588989  n/a   
 
 
-
 
NC_008726  Mvan_2641  Holliday junction resolvase YqgF  32.17 
 
 
175 aa  71.2  0.000000000004  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013515  Smon_0417  Holliday junction resolvase YqgF  32.14 
 
 
142 aa  70.9  0.000000000005  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_009487  SaurJH9_1673  Holliday junction resolvase-like protein  28.17 
 
 
142 aa  70.1  0.000000000009  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.514842  n/a   
 
 
-
 
NC_009632  SaurJH1_1707  Holliday junction resolvase-like protein  28.17 
 
 
142 aa  70.1  0.000000000009  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.24342  n/a   
 
 
-
 
NC_014248  Aazo_4148  Holliday junction resolvase YqgF  33.33 
 
 
158 aa  69.7  0.00000000001  'Nostoc azollae' 0708  Bacteria  normal  0.927535  n/a   
 
 
-
 
NC_002976  SERP1180  Holliday junction resolvase-like protein  29.71 
 
 
142 aa  69.7  0.00000000001  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_5401  Holliday junction resolvase YqgF  32.62 
 
 
139 aa  69.7  0.00000000001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.616966  normal  0.68966 
 
 
-
 
NC_013421  Pecwa_3911  Holliday junction resolvase-like protein  34.56 
 
 
139 aa  69.3  0.00000000001  Pectobacterium wasabiae WPP163  Bacteria  normal  0.0877728  n/a   
 
 
-
 
NC_011726  PCC8801_1942  Holliday junction resolvase-like protein  33.1 
 
 
139 aa  69.3  0.00000000002  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1969  Holliday junction resolvase-like protein  33.1 
 
 
139 aa  69.3  0.00000000002  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.0212683 
 
 
-
 
NC_013947  Snas_3877  Holliday junction resolvase YqgF  29.25 
 
 
151 aa  69.3  0.00000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.843962  normal 
 
 
-
 
NC_008261  CPF_2031  Holliday junction resolvase-like protein  30.37 
 
 
137 aa  68.6  0.00000000003  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_1748  Holliday junction resolvase-like protein  30.37 
 
 
137 aa  68.6  0.00000000003  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_3353  Holliday junction resolvase-like protein  34.53 
 
 
138 aa  68.2  0.00000000003  Enterobacter sp. 638  Bacteria  normal  0.2584  decreased coverage  0.0020385 
 
 
-
 
NC_011831  Cagg_0094  Holliday junction resolvase YqgF  32.85 
 
 
142 aa  67.8  0.00000000005  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.0018567  normal 
 
 
-
 
NC_013204  Elen_2554  Holliday junction resolvase YqgF  26.81 
 
 
138 aa  67.4  0.00000000006  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_4469  Holliday junction resolvase-like protein  28.67 
 
 
137 aa  67  0.00000000007  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.000000240455  n/a   
 
 
-
 
NC_005945  BAS4282  Holliday junction resolvase-like protein  28.67 
 
 
137 aa  67  0.00000000007  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.000000036093  n/a   
 
 
-
 
NC_005957  BT9727_4119  Holliday junction resolvase-like protein  28.67 
 
 
137 aa  67  0.00000000007  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  3.61572e-18  n/a   
 
 
-
 
NC_006274  BCZK4130  Holliday junction resolvase-like protein  28.67 
 
 
137 aa  67  0.00000000007  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000238321  n/a   
 
 
-
 
NC_011773  BCAH820_4466  Holliday junction resolvase-like protein  28.67 
 
 
137 aa  67  0.00000000007  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000283196 
 
 
-
 
NC_007530  GBAA_4614  Holliday junction resolvase-like protein  28.67 
 
 
137 aa  67  0.00000000007  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  decreased coverage  0.0000000000846091  n/a   
 
 
-
 
NC_013411  GYMC61_0964  Holliday junction resolvase YqgF  32.86 
 
 
138 aa  67.4  0.00000000007  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009253  Dred_0775  Holliday junction resolvase YqgF  27.86 
 
 
137 aa  67  0.00000000007  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000000463594  n/a   
 
 
-
 
NC_011898  Ccel_2239  Holliday junction resolvase-like protein  27.86 
 
 
142 aa  67  0.00000000008  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.0000140275  n/a   
 
 
-
 
NC_009428  Rsph17025_1879  Holliday junction resolvase-like protein  30 
 
 
160 aa  67  0.00000000008  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.620593  normal 
 
 
-
 
NC_013205  Aaci_2024  Holliday junction resolvase YqgF  29.63 
 
 
144 aa  67  0.00000000008  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.330713  n/a   
 
 
-
 
NC_012793  GWCH70_2488  Holliday junction resolvase YqgF  31.94 
 
 
138 aa  67  0.00000000008  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000680199  n/a   
 
 
-
 
NC_013216  Dtox_2265  Holliday junction resolvase YqgF  28.37 
 
 
139 aa  66.2  0.0000000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  hitchhiker  0.0000233904 
 
 
-
 
NC_007492  Pfl01_5312  Holliday junction resolvase-like protein  31.16 
 
 
145 aa  66.2  0.0000000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0190801  normal  0.217295 
 
 
-
 
NC_014158  Tpau_1976  Holliday junction resolvase YqgF  32.64 
 
 
161 aa  66.6  0.0000000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.133397  n/a   
 
 
-
 
NC_009674  Bcer98_3099  Holliday junction resolvase-like protein  27.97 
 
 
137 aa  66.2  0.0000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00212776  n/a   
 
 
-
 
NC_011772  BCG9842_B0730  Holliday junction resolvase-like protein  28.67 
 
 
137 aa  66.6  0.0000000001  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000542239  normal 
 
 
-
 
NC_011353  ECH74115_4252  Holliday junction resolvase-like protein  33.81 
 
 
138 aa  66.6  0.0000000001  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.367892  normal  0.370097 
 
 
-
 
NC_008148  Rxyl_1360  Holliday junction resolvase YqgF  28.79 
 
 
139 aa  66.2  0.0000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0122615  n/a   
 
 
-
 
NC_010718  Nther_1778  Holliday junction resolvase YqgF  29.5 
 
 
141 aa  66.6  0.0000000001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.140554 
 
 
-
 
NC_012669  Bcav_2015  Holliday junction resolvase YqgF  27.14 
 
 
163 aa  66.2  0.0000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.756916  normal  0.07881 
 
 
-
 
NC_010320  Teth514_1491  Holliday junction resolvase-like protein  32.61 
 
 
139 aa  66.6  0.0000000001  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.0000000000748947  n/a   
 
 
-
 
NC_013739  Cwoe_3035  Holliday junction resolvase YqgF  31.85 
 
 
133 aa  66.6  0.0000000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.0101605  normal  0.0662243 
 
 
-
 
NC_013525  Tter_0088  Holliday junction resolvase YqgF  32.14 
 
 
149 aa  65.9  0.0000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011094  SeSA_A3271  Holliday junction resolvase-like protein  32.12 
 
 
138 aa  65.5  0.0000000002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.0744312 
 
 
-
 
NC_010184  BcerKBAB4_4233  Holliday junction resolvase-like protein  28.67 
 
 
137 aa  66.2  0.0000000002  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000272031  n/a   
 
 
-
 
NC_009801  EcE24377A_3292  Holliday junction resolvase-like protein  33.09 
 
 
138 aa  65.9  0.0000000002  Escherichia coli E24377A  Bacteria  normal  0.684819  n/a   
 
 
-
 
NC_007604  Synpcc7942_2398  Holliday junction resolvase-like protein  32.37 
 
 
149 aa  65.9  0.0000000002  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0366153  hitchhiker  0.00151496 
 
 
-
 
NC_011083  SeHA_C3336  Holliday junction resolvase-like protein  32.12 
 
 
138 aa  65.5  0.0000000002  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.392173 
 
 
-
 
NC_011149  SeAg_B3260  Holliday junction resolvase-like protein  32.12 
 
 
138 aa  65.5  0.0000000002  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.254908  n/a   
 
 
-
 
NC_009077  Mjls_2388  Holliday junction resolvase-like protein  31.43 
 
 
169 aa  65.5  0.0000000002  Mycobacterium sp. JLS  Bacteria  normal  normal  0.0472019 
 
 
-
 
NC_011080  SNSL254_A3344  Holliday junction resolvase-like protein  32.12 
 
 
138 aa  65.9  0.0000000002  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.130119  normal  0.247443 
 
 
-
 
NC_010658  SbBS512_E3381  Holliday junction resolvase-like protein  33.09 
 
 
138 aa  65.9  0.0000000002  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A4506  Holliday junction resolvase-like protein  27.97 
 
 
137 aa  65.5  0.0000000002  Bacillus cereus B4264  Bacteria  normal  0.860088  n/a   
 
 
-
 
NC_008346  Swol_0470  Holliday junction resolvase YqgF  30.88 
 
 
141 aa  65.9  0.0000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.00000000599692  n/a   
 
 
-
 
NC_012917  PC1_3713  Holliday junction resolvase-like protein  33.09 
 
 
139 aa  65.5  0.0000000002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0641904  n/a   
 
 
-
 
NC_010498  EcSMS35_3091  Holliday junction resolvase-like protein  33.09 
 
 
138 aa  65.9  0.0000000002  Escherichia coli SMS-3-5  Bacteria  normal  0.372008  decreased coverage  0.00000514809 
 
 
-
 
NC_011894  Mnod_3314  Holliday junction resolvase YqgF  30.37 
 
 
163 aa  65.1  0.0000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
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