Gene CPR_1748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1748 
Symbol 
ID4204217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand- 
Start bp1946111 
End bp1946524 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content33% 
IMG OID642566298 
ProductHolliday junction resolvase-like protein 
Protein accessionYP_699063 
Protein GI110803306 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATTT TAGGTTTAGA TATCGGAAGT AAAACTATAG GAGTTGCAGT AAGTGATCCA 
CTTGGATGGA CAGCTCAAGG TGTAACAACT ATAAAAAGAG ATTGCTACAC TAAAGACGTA 
GAGGCAGTCA TGAAAATATG CAAAGAATAT GGAGTAGAAA CTATAGTTGC AGGTATGCCA 
AAAAATATGA ATGGAACAAT AGGACCATCT GGAGAAATGG TTAAAAATTT ATGTGAACAA 
ATTGAAAAAT CATTTGATGG TAAAATAGAG TTTTGGGATG AAAGACTTAC AACAGTTGCT 
GCTCATAGAG CAATGCTAGA AGCGGATTTA TCAAGAGCGA AAAGAAAAAA AATAGTCGAT 
AAAATAGCGG CTACTTATAT ATTACAAGGA TACTTAGACA GAATATCAAA ATAA
 
Protein sequence
MRILGLDIGS KTIGVAVSDP LGWTAQGVTT IKRDCYTKDV EAVMKICKEY GVETIVAGMP 
KNMNGTIGPS GEMVKNLCEQ IEKSFDGKIE FWDERLTTVA AHRAMLEADL SRAKRKKIVD 
KIAATYILQG YLDRISK