| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4870 |
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| Symbol | |
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| ID | 5190919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5463837 |
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| End bp | 5464262 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640589355 |
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| Product | Holliday junction resolvase-like protein |
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| Protein accession | YP_001270174 |
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| Protein GI | 148550072 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
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| TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0143218 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGAGC TACGCCTGCT GCTGGGCTTC GACTATGGCA GCAAACAGAT CGGCGTGGCC
GTCGGCCAGG TGATTACCGG CCAGGCCCGC GAACTGTGCA CCCTGAAGGC GCAGAACGGC
GTACCGGACT GGGCCCAGGT GGAAAAGCTG ATTGCCGAAT GGAAGCCAGA TGCCATTGTC
GTCGGCCTGC CGCTGAACAT GGACGGTACG CCCAGCGAGA TGAGCGCCCG CGCCGAAAAG
TTCGCCCGCC GCCTGAACGG CCGCTTCAAC CTGCCCGTGC ACACGCACGA CGAGCGCCTG
ACCACCTTCG AGGCCAAAGG CGAGCGCATG GCCCGTGGCG GCCAGCGTGG CAGCTACCGC
GACAATCCGG TCGATGCCAT TGCCGCTGCC TTGCTGCTGC AAGGCTGGCT GGAGGCCAAT
ACCTGA
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| Protein sequence | MAELRLLLGF DYGSKQIGVA VGQVITGQAR ELCTLKAQNG VPDWAQVEKL IAEWKPDAIV
VGLPLNMDGT PSEMSARAEK FARRLNGRFN LPVHTHDERL TTFEAKGERM ARGGQRGSYR
DNPVDAIAAA LLLQGWLEAN T
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