Gene Clim_2406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2406 
Symbol 
ID6355877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp2636942 
End bp2637370 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content53% 
IMG OID642669996 
ProductHolliday junction resolvase YqgF 
Protein accessionYP_001944406 
Protein GI189347877 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.406379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTGA GCAGAAAAAA AAGAATCGTG GCGATAGATT TCGGGACAAA ACGTATAGGA 
TTTGCCGAAA GCGATCCTCT TCAGTTGTTT GCCCAGCCGG TAGGCACTGT TGACCGGGCT 
GAACTGTTCG AAAAACTTGA ACAGATGGCA CGCAATGAAG AGATCGATAA AATTCTTGTC 
GGTTACCCGC TCAACGACGA CGGCACGCAA AACCGGATGA CCGGAGTGAT CGACCGGTTC 
ATTGAAGAGC TTGCTCTCGG ATTCCCCGGT CTGCCTGTCG AACGGGTCGA TGAGCATCGC 
TCTTCCCGTG ACGCCATGCA GATTCTTGCG GCGTCGGGTA TCAGCAGAAA AGAACGGAAC 
CGAAAGGGCC GGCTTGACTG TGCTGCAGCA TGCGTTATTC TCAGGGAGTA TCTTGACGCG 
CGCCGATAA
 
Protein sequence
MSLSRKKRIV AIDFGTKRIG FAESDPLQLF AQPVGTVDRA ELFEKLEQMA RNEEIDKILV 
GYPLNDDGTQ NRMTGVIDRF IEELALGFPG LPVERVDEHR SSRDAMQILA ASGISRKERN 
RKGRLDCAAA CVILREYLDA RR