Gene Rxyl_1360 details

Gene Information

• Locus tag: Rxyl_1360
• ID: 4117179
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: +
• Start bp: 1388428
• End bp: 1388847
• Gene Length: 420 bp
• Protein Length: 139 aa
• Translation table: 11
• GC content: 75%
• IMG OID: 638036153
• Product: Holliday junction resolvase YqgF
• Protein accession: YP_644135
• Protein GI: 108804198
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)
• TIGRFAM ID: [TIGR00250] RNAse H-fold protein YqgF

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0122615
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGTCCGC CCGAGGGGAG GGTGGCCGCG CTCGACTTGG GCGAGGTCTG GACGGGGGTC 
GCCGTCTCGG ACCCCACGAG GACCCTGGCC CGGCCGCTGG AGGTGGTCAG AACCTCGGAG 
CTCCCCGGCG TTCTGCGCCG TCTCGTCCGC GAGGAGGGGG TCGGGGAGGT CCTGGTCGGC 
CTCCCGCGCA CGCTGCGGGG GGAGGTGGGC TTTCAGGCGC GGCGGGTGTC GGATAGACTC 
TCCTCGCTGA GGGCCGGCTT CCCGGAGGTC CGGTTTGTGG AGTGGGACGA GCGGCTCACC 
ACGAAGGTGG TCTCCGGGCC GCTCCGGGAG GGGCGGAGGC GCGGCCGCCG GGAGCGCGTG 
GACCACCTGG CCGCCGCCCG GATGCTGCAG GAGTACCTCG AGCTGGGAGG GGGCGCTTGA 

 

Protein sequence

MSPPEGRVAA LDLGEVWTGV AVSDPTRTLA RPLEVVRTSE LPGVLRRLVR EEGVGEVLVG 
LPRTLRGEVG FQARRVSDRL SSLRAGFPEV RFVEWDERLT TKVVSGPLRE GRRRGRRERV 
DHLAAARMLQ EYLELGGGA