207 homologs were found in PanDaTox collection
for query gene Rxyl_1360 on replicon NC_008148
Organism: Rubrobacter xylanophilus DSM 9941



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008148  Rxyl_1360  Holliday junction resolvase YqgF  100 
 
 		 139 aa  261  2e-69  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0122615  n/a   
 
 
-
 
NC_013522  Taci_1032  Holliday junction resolvase YqgF  45.26 
 
 		 142 aa  96.3  1e-19  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_3713  Holliday junction resolvase YqgF  41.04 
 
 		 146 aa  84.7  4e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0658941  hitchhiker  0.00476179 
 
 
-
 
NC_009523  RoseRS_3225  Holliday junction resolvase YqgF  39.57 
 
 		 141 aa  82  0.000000000000002  Roseiflexus sp. RS-1  Bacteria  normal  0.387387  normal  1 
 
 
-
 
NC_013501  Rmar_0873  Holliday junction resolvase YqgF  40.91 
 
 		 145 aa  78.2  0.00000000000004  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_008255  CHU_0692  Holliday junction resolvase-like protein  29.32 
 
 		 152 aa  75.9  0.0000000000002  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  1  normal  0.458381 
 
 
-
 
NC_013517  Sterm_2739  Holliday junction resolvase YqgF  33.85 
 
 		 137 aa  75.1  0.0000000000003  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0474  Holliday junction resolvase YqgF  32.82 
 
 		 145 aa  74.7  0.0000000000003  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00800439  n/a   
 
 
-
 
NC_013947  Snas_3877  Holliday junction resolvase YqgF  41.78 
 
 		 151 aa  75.1  0.0000000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.843962  normal  1 
 
 
-
 
NC_013037  Dfer_4051  Holliday junction resolvase YqgF  31.34 
 
 		 137 aa  73.9  0.0000000000007  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  hitchhiker  0.00000789262 
 
 
-
 
NC_010830  Aasi_1327  Holliday junction resolvase-like protein  31.06 
 
 		 141 aa  73.6  0.0000000000008  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal  0.513618 
 
 
-
 
NC_002976  SERP1180  Holliday junction resolvase-like protein  30.37 
 
 		 142 aa  72.8  0.000000000002  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013162  Coch_1395  Holliday junction resolvase YqgF  30.53 
 
 		 143 aa  72.4  0.000000000002  Capnocytophaga ochracea DSM 7271  Bacteria  normal  1  n/a   
 
 
-
 
NC_010320  Teth514_1491  Holliday junction resolvase-like protein  33.58 
 
 		 139 aa  72.4  0.000000000002  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.0000000000748947  n/a   
 
 
-
 
NC_013132  Cpin_1903  Holliday junction resolvase YqgF  31.58 
 
 		 136 aa  72  0.000000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009012  Cthe_0153  Holliday junction resolvase-like protein  33.58 
 
 		 141 aa  72.4  0.000000000002  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0185653  n/a   
 
 
-
 
NC_013171  Apre_0938  Holliday junction resolvase YqgF  35.07 
 
 		 139 aa  72.4  0.000000000002  Anaerococcus prevotii DSM 20548  Bacteria  normal  1  n/a   
 
 
-
 
NC_009487  SaurJH9_1673  Holliday junction resolvase-like protein  29.2 
 
 		 142 aa  72  0.000000000002  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.514842  n/a   
 
 
-
 
NC_009632  SaurJH1_1707  Holliday junction resolvase-like protein  29.2 
 
 		 142 aa  72  0.000000000002  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.24342  n/a   
 
 
-
 
NC_013730  Slin_5430  Holliday junction resolvase YqgF  33.83 
 
 		 142 aa  71.6  0.000000000003  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009253  Dred_0775  Holliday junction resolvase YqgF  35.29 
 
 		 137 aa  72  0.000000000003  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000000463594  n/a   
 
 
-
 
NC_013757  Gobs_3157  Holliday junction resolvase YqgF  42.75 
 
 		 222 aa  71.2  0.000000000004  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.588989  n/a   
 
 
-
 
NC_014230  CA2559_06155  Holliday junction resolvase-like protein  30.3 
 
 		 135 aa  71.2  0.000000000005  Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_1778  Holliday junction resolvase YqgF  32.33 
 
 		 141 aa  70.9  0.000000000005  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  0.140554 
 
 
-
 
NC_013385  Adeg_1438  Holliday junction resolvase YqgF  42.54 
 
 		 146 aa  70.9  0.000000000005  Ammonifex degensii KC4  Bacteria  normal  0.0335959  n/a   
 
 
-
 
NC_007644  Moth_1640  Holliday junction resolvase YqgF  41.48 
 
 		 140 aa  70.5  0.000000000006  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.278901  normal  0.163549 
 
 
-
 
NC_013216  Dtox_2265  Holliday junction resolvase YqgF  37.78 
 
 		 139 aa  70.5  0.000000000008  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  hitchhiker  0.0000233904 
 
 
-
 
NC_009441  Fjoh_2528  Holliday junction resolvase-like protein  27.48 
 
 		 138 aa  70.1  0.000000000008  Flavobacterium johnsoniae UW101  Bacteria  normal  0.551236  n/a   
 
 
-
 
NC_011661  Dtur_1024  Holliday junction resolvase YqgF  35.29 
 
 		 141 aa  69.3  0.00000000001  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_3633  Holliday junction resolvase YqgF  37.68 
 
 		 158 aa  69.7  0.00000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_1976  Holliday junction resolvase YqgF  39.01 
 
 		 161 aa  68.2  0.00000000003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.133397  n/a   
 
 
-
 
NC_010001  Cphy_2297  Holliday junction resolvase YqgF  35.51 
 
 		 150 aa  68.2  0.00000000004  Clostridium phytofermentans ISDg  Bacteria  normal  0.470334  n/a   
 
 
-
 
NC_010831  Cphamn1_2429  Holliday junction resolvase YqgF  28.57 
 
 		 144 aa  67.4  0.00000000006  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009338  Mflv_3762  Holliday junction resolvase YqgF  41.55 
 
 		 175 aa  67.4  0.00000000006  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.454353 
 
 
-
 
NC_008146  Mmcs_2347  Holliday junction resolvase-like protein  38.85 
 
 		 169 aa  66.2  0.0000000001  Mycobacterium sp. MCS  Bacteria  normal  0.502005  n/a   
 
 
-
 
NC_008261  CPF_2031  Holliday junction resolvase-like protein  31.11 
 
 		 137 aa  66.6  0.0000000001  Clostridium perfringens ATCC 13124  Bacteria  normal  1  n/a   
 
 
-
 
NC_008262  CPR_1748  Holliday junction resolvase-like protein  31.11 
 
 		 137 aa  66.6  0.0000000001  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_2394  Holliday junction resolvase-like protein  38.85 
 
 		 169 aa  66.2  0.0000000001  Mycobacterium sp. KMS  Bacteria  normal  1  normal  0.345644 
 
 
-
 
NC_008726  Mvan_2641  Holliday junction resolvase YqgF  39.57 
 
 		 175 aa  66.2  0.0000000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013440  Hoch_5401  Holliday junction resolvase YqgF  41.04 
 
 		 139 aa  66.2  0.0000000001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.616966  normal  0.68966 
 
 
-
 
NC_013061  Phep_0074  Holliday junction resolvase YqgF  27.27 
 
 		 138 aa  65.9  0.0000000002  Pedobacter heparinus DSM 2366  Bacteria  normal  0.974882  normal  1 
 
 
-
 
NC_009077  Mjls_2388  Holliday junction resolvase-like protein  38.85 
 
 		 169 aa  65.5  0.0000000003  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.0472019 
 
 
-
 
NC_012034  Athe_1211  Holliday junction resolvase YqgF  29.2 
 
 		 138 aa  64.7  0.0000000004  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.271637  n/a   
 
 
-
 
NC_008527  LACR_0138  Holliday junction resolvase-like protein  34.31 
 
 		 143 aa  64.7  0.0000000004  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  1  n/a   
 
 
-
 
NC_008578  Acel_1329  Holliday junction resolvase YqgF  42.31 
 
 		 173 aa  64.7  0.0000000004  Acidothermus cellulolyticus 11B  Bacteria  normal  0.0531797  normal  0.27422 
 
 
-
 
NC_008686  Pden_0510  Holliday junction resolvase-like protein  36.36 
 
 		 158 aa  64.3  0.0000000005  Paracoccus denitrificans PD1222  Bacteria  normal  0.556579  normal  1 
 
 
-
 
NC_010424  Daud_0915  Holliday junction resolvase YqgF  39.85 
 
 		 141 aa  64.3  0.0000000006  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.242003  n/a   
 
 
-
 
NC_011060  Ppha_2805  Holliday junction resolvase YqgF  32.12 
 
 		 145 aa  63.5  0.0000000009  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013441  Gbro_2321  Holliday junction resolvase YqgF  39.29 
 
 		 143 aa  63.2  0.000000001  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_15280  conserved hypothetical protein TIGR00250  40.41 
 
 		 154 aa  63.2  0.000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0307172  normal  0.652486 
 
 
-
 
NC_011365  Gdia_3370  Holliday junction resolvase YqgF  36.23 
 
 		 154 aa  63.5  0.000000001  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  1  normal  0.13465 
 
 
-
 
NC_011831  Cagg_0094  Holliday junction resolvase YqgF  36.76 
 
 		 142 aa  62.8  0.000000002  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.0018567  normal  1 
 
 
-
 
NC_010655  Amuc_1191  Holliday junction resolvase YqgF  29.69 
 
 		 141 aa  62.8  0.000000002  Akkermansia muciniphila ATCC BAA-835  Bacteria  hitchhiker  0.0000237997  normal  1 
 
 
-
 
NC_008783  BARBAKC583_0838  hypothetical protein  31.82 
 
 		 161 aa  62  0.000000002  Bartonella bacilliformis KC583  Bacteria  normal  0.115372  n/a   
 
 
-
 
NC_009674  Bcer98_3099  Holliday junction resolvase-like protein  32.59 
 
 		 137 aa  62.4  0.000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00212776  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4233  Holliday junction resolvase-like protein  31.11 
 
 		 137 aa  62.4  0.000000002  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000272031  n/a   
 
 
-
 
NC_012793  GWCH70_2488  Holliday junction resolvase YqgF  34.07 
 
 		 138 aa  61.6  0.000000003  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000680199  n/a   
 
 
-
 
NC_011725  BCB4264_A4506  Holliday junction resolvase-like protein  30.37 
 
 		 137 aa  61.6  0.000000004  Bacillus cereus B4264  Bacteria  normal  0.860088  n/a   
 
 
-
 
NC_011666  Msil_0742  Holliday junction resolvase-like protein  35.51 
 
 		 161 aa  61.2  0.000000004  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0120989 
 
 
-
 
NC_011989  Avi_1768  Holliday junction resolvase-like protein  35.51 
 
 		 158 aa  61.2  0.000000004  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_4469  Holliday junction resolvase-like protein  30.37 
 
 		 137 aa  61.2  0.000000005  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.000000240455  n/a   
 
 
-
 
NC_005945  BAS4282  Holliday junction resolvase-like protein  30.37 
 
 		 137 aa  61.2  0.000000005  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.000000036093  n/a   
 
 
-
 
NC_005957  BT9727_4119  Holliday junction resolvase-like protein  30.37 
 
 		 137 aa  61.2  0.000000005  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  3.61572e-18  n/a   
 
 
-
 
NC_006274  BCZK4130  Holliday junction resolvase-like protein  30.37 
 
 		 137 aa  61.2  0.000000005  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000238321  n/a   
 
 
-
 
NC_007530  GBAA_4614  Holliday junction resolvase-like protein  30.37 
 
 		 137 aa  61.2  0.000000005  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  decreased coverage  0.0000000000846091  n/a   
 
 
-
 
NC_011773  BCAH820_4466  Holliday junction resolvase-like protein  30.37 
 
 		 137 aa  61.2  0.000000005  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000283196 
 
 
-
 
NC_008346  Swol_0470  Holliday junction resolvase YqgF  33.09 
 
 		 141 aa  60.8  0.000000005  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.00000000599692  n/a   
 
 
-
 
NC_010338  Caul_1518  Holliday junction resolvase YqgF  35.34 
 
 		 164 aa  60.8  0.000000006  Caulobacter sp. K31  Bacteria  normal  1  normal  0.470214 
 
 
-
 
NC_010505  Mrad2831_0475  Holliday junction resolvase YqgF  36.3 
 
 		 170 aa  60.8  0.000000006  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.437798  normal  0.0955854 
 
 
-
 
NC_011658  BCAH187_A4519  Holliday junction resolvase-like protein  30.37 
 
 		 137 aa  60.8  0.000000006  Bacillus cereus AH187  Bacteria  hitchhiker  0.000203205  n/a   
 
 
-
 
NC_010725  Mpop_3519  Holliday junction resolvase YqgF  36.5 
 
 		 165 aa  60.8  0.000000006  Methylobacterium populi BJ001  Bacteria  normal  0.432695  normal  1 
 
 
-
 
NC_010581  Bind_1895  Holliday junction resolvase-like protein  33.09 
 
 		 165 aa  60.8  0.000000006  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.273411  normal  1 
 
 
-
 
NC_011898  Ccel_2239  Holliday junction resolvase-like protein  27.61 
 
 		 142 aa  60.5  0.000000007  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.0000140275  n/a   
 
 
-
 
NC_011772  BCG9842_B0730  Holliday junction resolvase-like protein  30.37 
 
 		 137 aa  60.5  0.000000007  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000542239  normal  1 
 
 
-
 
NC_013411  GYMC61_0964  Holliday junction resolvase YqgF  35.56 
 
 		 138 aa  60.8  0.000000007  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009921  Franean1_1695  Holliday junction resolvase-like protein  40.71 
 
 		 188 aa  60.5  0.000000007  Frankia sp. EAN1pec  Bacteria  normal  0.0458229  normal  0.165399 
 
 
-
 
NC_013172  Bfae_16350  conserved hypothetical protein TIGR00250  34.31 
 
 		 181 aa  60.5  0.000000008  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_3314  Holliday junction resolvase YqgF  35.51 
 
 		 163 aa  60.1  0.000000009  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_009428  Rsph17025_1879  Holliday junction resolvase-like protein  34.31 
 
 		 160 aa  60.1  0.000000009  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.620593  normal  1 
 
 
-
 
NC_013204  Elen_2554  Holliday junction resolvase YqgF  36.3 
 
 		 138 aa  60.1  0.000000009  Eggerthella lenta DSM 2243  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_3319  Holliday junction resolvase YqgF  37.23 
 
 		 160 aa  60.1  0.000000009  Methylobacterium extorquens PA1  Bacteria  normal  0.587532  normal  0.657687 
 
 
-
 
NC_011757  Mchl_3643  Holliday junction resolvase YqgF  37.23 
 
 		 165 aa  60.1  0.00000001  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.724014 
 
 
-
 
NC_002950  PG2202  Holliday junction resolvase-like protein  30.83 
 
 		 138 aa  59.7  0.00000001  Porphyromonas gingivalis W83  Bacteria  n/a    normal  1 
 
 
-
 
NC_013515  Smon_0417  Holliday junction resolvase YqgF  32.31 
 
 		 142 aa  60.1  0.00000001  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_008699  Noca_2408  Holliday junction resolvase-like protein  42.22 
 
 		 156 aa  59.7  0.00000001  Nocardioides sp. JS614  Bacteria  normal  0.332292  n/a   
 
 
-
 
NC_009504  BOV_A0563  Holliday junction resolvase-like protein  35.51 
 
 		 162 aa  59.7  0.00000001  Brucella ovis ATCC 25840  Bacteria  normal  1  n/a   
 
 
-
 
NC_009719  Plav_2841  Holliday junction resolvase YqgF  31.58 
 
 		 182 aa  59.7  0.00000001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.636675  normal  0.911101 
 
 
-
 
NC_009952  Dshi_1064  Holliday junction resolvase-like protein  37.41 
 
 		 163 aa  59.7  0.00000001  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.282287  normal  1 
 
 
-
 
NC_007493  RSP_2684  Holliday junction resolvase-like protein  36.23 
 
 		 160 aa  58.9  0.00000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.173322  n/a   
 
 
-
 
NC_010511  M446_4344  Holliday junction resolvase YqgF  37.23 
 
 		 168 aa  58.9  0.00000002  Methylobacterium sp. 4-46  Bacteria  normal  0.892789  normal  0.367855 
 
 
-
 
NC_008044  TM1040_0967  Holliday junction resolvase-like protein  34.03 
 
 		 157 aa  58.9  0.00000002  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009049  Rsph17029_1342  Holliday junction resolvase-like protein  36.23 
 
 		 160 aa  58.9  0.00000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  decreased coverage  0.00888056  normal  0.184568 
 
 
-
 
NC_009455  DehaBAV1_0048  Holliday junction resolvase YqgF  32 
 
 		 133 aa  58.9  0.00000002  Dehalococcoides sp. BAV1  Bacteria  normal  0.112526  n/a   
 
 
-
 
NC_012669  Bcav_2015  Holliday junction resolvase YqgF  36.43 
 
 		 163 aa  58.2  0.00000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.756916  normal  0.07881 
 
 
-
 
NC_008528  OEOE_1165  RNase H-like ribonuclease  32.39 
 
 		 144 aa  58.5  0.00000003  Oenococcus oeni PSU-1  Bacteria  normal  0.345189  n/a   
 
 
-
 
NC_008541  Arth_2277  Holliday junction resolvase YqgF  35.42 
 
 		 199 aa  58.5  0.00000003  Arthrobacter sp. FB24  Bacteria  normal  0.117352  n/a   
 
 
-
 
NC_013203  Apar_0458  Holliday junction resolvase YqgF  36.09 
 
 		 140 aa  58.5  0.00000003  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004116  SAG2090  Holliday junction resolvase-like protein  36.03 
 
 		 136 aa  58.2  0.00000004  Streptococcus agalactiae 2603V/R  Bacteria  hitchhiker  0.000724166  n/a   
 
 
-
 
NC_004311  BRA0597  Holliday junction resolvase-like protein  34.78 
 
 		 162 aa  58.2  0.00000004  Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_009636  Smed_0941  Holliday junction resolvase-like protein  35.25 
 
 		 165 aa  57.8  0.00000004  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.22726 
 
 
-
 
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