More than 300 homologs were found in PanDaTox collection
for query gene Apar_0458 on replicon NC_013203
Organism: Atopobium parvulum DSM 20469



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013203  Apar_0458  Holliday junction resolvase YqgF  100 
 
 		 140 aa  283  4e-76  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013204  Elen_2554  Holliday junction resolvase YqgF  65.19 
 
 		 138 aa  186  8e-47  Eggerthella lenta DSM 2243  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013165  Shel_07810  conserved hypothetical protein TIGR00250  66.67 
 
 		 138 aa  181  2.0000000000000003e-45  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  0.0182311 
 
 
-
 
NC_013170  Ccur_05110  conserved hypothetical protein TIGR00250  63.77 
 
 		 140 aa  171  2.9999999999999996e-42  Cryptobacterium curtum DSM 15641  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011729  PCC7424_3098  Holliday junction resolvase-like protein  38.46 
 
 		 151 aa  95.5  2e-19  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_009675  Anae109_2535  Holliday junction resolvase-like protein  37.04 
 
 		 137 aa  95.1  3e-19  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  0.52249 
 
 
-
 
NC_009523  RoseRS_3225  Holliday junction resolvase YqgF  35.82 
 
 		 141 aa  94.4  5e-19  Roseiflexus sp. RS-1  Bacteria  normal  0.387387  normal  1 
 
 
-
 
NC_010320  Teth514_1491  Holliday junction resolvase-like protein  34.53 
 
 		 139 aa  94  7e-19  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.0000000000748947  n/a   
 
 
-
 
NC_009767  Rcas_3713  Holliday junction resolvase YqgF  35.07 
 
 		 146 aa  93.6  8e-19  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0658941  hitchhiker  0.00476179 
 
 
-
 
NC_008146  Mmcs_2347  Holliday junction resolvase-like protein  38.81 
 
 		 169 aa  92.8  1e-18  Mycobacterium sp. MCS  Bacteria  normal  0.502005  n/a   
 
 
-
 
NC_008705  Mkms_2394  Holliday junction resolvase-like protein  38.81 
 
 		 169 aa  92.8  1e-18  Mycobacterium sp. KMS  Bacteria  normal  1  normal  0.345644 
 
 
-
 
NC_011831  Cagg_0094  Holliday junction resolvase YqgF  37.04 
 
 		 142 aa  92  2e-18  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.0018567  normal  1 
 
 
-
 
NC_009077  Mjls_2388  Holliday junction resolvase-like protein  38.81 
 
 		 169 aa  90.9  5e-18  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.0472019 
 
 
-
 
NC_013385  Adeg_1438  Holliday junction resolvase YqgF  41.26 
 
 		 146 aa  91.3  5e-18  Ammonifex degensii KC4  Bacteria  normal  0.0335959  n/a   
 
 
-
 
NC_014158  Tpau_1976  Holliday junction resolvase YqgF  38.73 
 
 		 161 aa  90.5  7e-18  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.133397  n/a   
 
 
-
 
NC_008726  Mvan_2641  Holliday junction resolvase YqgF  37.31 
 
 		 175 aa  89.7  1e-17  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009338  Mflv_3762  Holliday junction resolvase YqgF  37.31 
 
 		 175 aa  89.4  2e-17  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.454353 
 
 
-
 
NC_011899  Hore_05800  Holliday junction resolvase YqgF  35.56 
 
 		 140 aa  87.8  4e-17  Halothermothrix orenii H 168  Bacteria  normal  0.209228  n/a   
 
 
-
 
NC_007947  Mfla_2100  Holliday junction resolvase-like protein  35.61 
 
 		 146 aa  87.4  6e-17  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011884  Cyan7425_2514  Holliday junction resolvase-like protein  36.15 
 
 		 150 aa  87.4  6e-17  Cyanothece sp. PCC 7425  Bacteria  normal  0.36708  normal  1 
 
 
-
 
NC_010424  Daud_0915  Holliday junction resolvase YqgF  35.56 
 
 		 141 aa  87  8e-17  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.242003  n/a   
 
 
-
 
NC_007644  Moth_1640  Holliday junction resolvase YqgF  33.83 
 
 		 140 aa  86.7  1e-16  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.278901  normal  0.163549 
 
 
-
 
NC_009972  Haur_3633  Holliday junction resolvase YqgF  38.06 
 
 		 158 aa  86.7  1e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_3804  Holliday junction resolvase-like protein  33.85 
 
 		 151 aa  85.9  2e-16  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0796335  normal  1 
 
 
-
 
NC_007604  Synpcc7942_2398  Holliday junction resolvase-like protein  35.61 
 
 		 149 aa  85.9  2e-16  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0366153  hitchhiker  0.00151496 
 
 
-
 
NC_008312  Tery_4379  Holliday junction resolvase-like protein  32.59 
 
 		 149 aa  85.5  2e-16  Trichodesmium erythraeum IMS101  Bacteria  normal  0.556882  normal  0.251804 
 
 
-
 
NC_011145  AnaeK_2633  Holliday junction resolvase-like protein  38.35 
 
 		 137 aa  85.1  3e-16  Anaeromyxobacter sp. K  Bacteria  normal  0.854397  n/a   
 
 
-
 
NC_011891  A2cp1_2727  Holliday junction resolvase-like protein  38.35 
 
 		 137 aa  84.7  4e-16  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011726  PCC8801_1942  Holliday junction resolvase-like protein  34.85 
 
 		 139 aa  83.2  0.000000000000001  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007760  Adeh_1232  Holliday junction resolvase-like protein  37.59 
 
 		 137 aa  82.8  0.000000000000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_013161  Cyan8802_1969  Holliday junction resolvase-like protein  34.85 
 
 		 139 aa  83.2  0.000000000000001  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  0.0212683 
 
 
-
 
NC_013216  Dtox_2265  Holliday junction resolvase YqgF  34.29 
 
 		 139 aa  82  0.000000000000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  hitchhiker  0.0000233904 
 
 
-
 
NC_013757  Gobs_3157  Holliday junction resolvase YqgF  33.82 
 
 		 222 aa  82.4  0.000000000000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.588989  n/a   
 
 
-
 
NC_009253  Dred_0775  Holliday junction resolvase YqgF  32.09 
 
 		 137 aa  82.4  0.000000000000002  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000000463594  n/a   
 
 
-
 
NC_010718  Nther_1778  Holliday junction resolvase YqgF  32.86 
 
 		 141 aa  81.3  0.000000000000004  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  0.140554 
 
 
-
 
NC_008261  CPF_2031  Holliday junction resolvase-like protein  34.59 
 
 		 137 aa  81.3  0.000000000000005  Clostridium perfringens ATCC 13124  Bacteria  normal  1  n/a   
 
 
-
 
NC_008262  CPR_1748  Holliday junction resolvase-like protein  34.59 
 
 		 137 aa  81.3  0.000000000000005  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_013522  Taci_1032  Holliday junction resolvase YqgF  37.04 
 
 		 142 aa  80.5  0.000000000000007  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_008346  Swol_0470  Holliday junction resolvase YqgF  32.84 
 
 		 141 aa  80.5  0.000000000000007  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.00000000599692  n/a   
 
 
-
 
NC_007298  Daro_3892  Holliday junction resolvase-like protein  34.09 
 
 		 146 aa  79.3  0.00000000000001  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008578  Acel_1329  Holliday junction resolvase YqgF  34.78 
 
 		 173 aa  79  0.00000000000002  Acidothermus cellulolyticus 11B  Bacteria  normal  0.0531797  normal  0.27422 
 
 
-
 
NC_014248  Aazo_4148  Holliday junction resolvase YqgF  31.82 
 
 		 158 aa  78.2  0.00000000000003  'Nostoc azollae' 0708  Bacteria  normal  0.927535  n/a   
 
 
-
 
NC_013131  Caci_2379  Holliday junction resolvase-like protein  36.88 
 
 		 171 aa  78.2  0.00000000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008527  LACR_0138  Holliday junction resolvase-like protein  32.85 
 
 		 143 aa  78.6  0.00000000000003  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  1  n/a   
 
 
-
 
NC_008532  STER_1938  Holliday junction resolvase-like protein  31.65 
 
 		 139 aa  78.6  0.00000000000003  Streptococcus thermophilus LMD-9  Bacteria  unclonable  0.0000000471473  n/a   
 
 
-
 
NC_008530  LGAS_0423  Holliday junction resolvase-like protein  33.33 
 
 		 143 aa  77.8  0.00000000000004  Lactobacillus gasseri ATCC 33323  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013456  VEA_002460  putative Holliday junction resolvase  33.82 
 
 		 141 aa  77.4  0.00000000000005  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_009380  Strop_1829  Holliday junction resolvase YqgF  33.1 
 
 		 153 aa  77.4  0.00000000000006  Salinispora tropica CNB-440  Bacteria  normal  0.0551936  normal  1 
 
 
-
 
NC_012669  Bcav_2015  Holliday junction resolvase YqgF  36.23 
 
 		 163 aa  77.4  0.00000000000006  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.756916  normal  0.07881 
 
 
-
 
NC_011661  Dtur_1024  Holliday junction resolvase YqgF  31.34 
 
 		 141 aa  77  0.00000000000009  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_0540  Holliday junction resolvase YqgF  31.54 
 
 		 156 aa  76.6  0.00000000000009  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009953  Sare_1820  Holliday junction resolvase YqgF  33.1 
 
 		 153 aa  76.3  0.0000000000001  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.0000610168 
 
 
-
 
NC_009457  VC0395_A0018  Holliday junction resolvase-like protein  32.85 
 
 		 140 aa  76.6  0.0000000000001  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_3877  Holliday junction resolvase YqgF  36.88 
 
 		 151 aa  76.3  0.0000000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.843962  normal  1 
 
 
-
 
NC_013517  Sterm_2739  Holliday junction resolvase YqgF  36.76 
 
 		 137 aa  76.3  0.0000000000001  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_009565  TBFG_12575  Holliday junction resolvase-like protein  36.03 
 
 		 170 aa  76.3  0.0000000000001  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00396279  normal  0.126571 
 
 
-
 
NC_008531  LEUM_0558  Holliday junction resolvase-like protein  31.91 
 
 		 143 aa  76.3  0.0000000000001  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  1  n/a   
 
 
-
 
NC_008709  Ping_1285  Holliday junction resolvase YqgF  29.55 
 
 		 145 aa  76.3  0.0000000000001  Psychromonas ingrahamii 37  Bacteria  normal  0.0394867  normal  1 
 
 
-
 
NC_008009  Acid345_0556  Holliday junction resolvase YqgF  35.61 
 
 		 153 aa  75.5  0.0000000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.901255  normal  0.0480752 
 
 
-
 
NC_013595  Sros_6093  endonuclease involved in recombination-like protein  34.75 
 
 		 163 aa  75.5  0.0000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0746227  normal  1 
 
 
-
 
NC_013093  Amir_5264  Holliday junction resolvase YqgF  38.24 
 
 		 170 aa  75.9  0.0000000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013521  Sked_17700  conserved hypothetical protein TIGR00250  36.05 
 
 		 167 aa  75.1  0.0000000000003  Sanguibacter keddieii DSM 10542  Bacteria  hitchhiker  0.00726332  normal  0.269027 
 
 
-
 
NC_011830  Dhaf_3562  Holliday junction resolvase-like protein  35.25 
 
 		 142 aa  75.1  0.0000000000003  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000000000000329746  n/a   
 
 
-
 
NC_013441  Gbro_2321  Holliday junction resolvase YqgF  35.29 
 
 		 143 aa  75.1  0.0000000000003  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009727  CBUD_2194  Holliday junction resolvase-like protein  33.09 
 
 		 141 aa  75.1  0.0000000000003  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.401443  n/a   
 
 
-
 
NC_013205  Aaci_2024  Holliday junction resolvase YqgF  34.59 
 
 		 144 aa  74.7  0.0000000000003  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.330713  n/a   
 
 
-
 
NC_008044  TM1040_0967  Holliday junction resolvase-like protein  33.59 
 
 		 157 aa  75.1  0.0000000000003  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010117  COXBURSA331_A2220  Holliday junction resolvase-like protein  33.09 
 
 		 141 aa  75.1  0.0000000000003  Coxiella burnetii RSA 331  Bacteria  hitchhiker  0.0000000031992  n/a   
 
 
-
 
NC_007912  Sde_3638  Holliday junction resolvase-like protein  30.23 
 
 		 142 aa  74.3  0.0000000000006  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008255  CHU_0692  Holliday junction resolvase-like protein  32.14 
 
 		 152 aa  73.9  0.0000000000006  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  1  normal  0.458381 
 
 
-
 
NC_008686  Pden_0510  Holliday junction resolvase-like protein  35.11 
 
 		 158 aa  73.9  0.0000000000006  Paracoccus denitrificans PD1222  Bacteria  normal  0.556579  normal  1 
 
 
-
 
NC_006368  lpp0637  Holliday junction resolvase-like protein  32.31 
 
 		 139 aa  73.9  0.0000000000007  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl0621  Holliday junction resolvase-like protein  32.56 
 
 		 139 aa  73.9  0.0000000000007  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_008541  Arth_2277  Holliday junction resolvase YqgF  35.17 
 
 		 199 aa  73.6  0.0000000000008  Arthrobacter sp. FB24  Bacteria  normal  0.117352  n/a   
 
 
-
 
NC_008699  Noca_2408  Holliday junction resolvase-like protein  35 
 
 		 156 aa  73.6  0.0000000000008  Nocardioides sp. JS614  Bacteria  normal  0.332292  n/a   
 
 
-
 
NC_012793  GWCH70_2488  Holliday junction resolvase YqgF  32.12 
 
 		 138 aa  73.6  0.0000000000009  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000680199  n/a   
 
 
-
 
NC_011898  Ccel_2239  Holliday junction resolvase-like protein  29.1 
 
 		 142 aa  72.8  0.000000000001  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.0000140275  n/a   
 
 
-
 
NC_014151  Cfla_1819  Holliday junction resolvase YqgF  34.97 
 
 		 190 aa  72.8  0.000000000001  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0503115  normal  1 
 
 
-
 
NC_011138  MADE_03294  Holliday junction resolvase-like protein  30.6 
 
 		 143 aa  73.6  0.000000000001  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.659098  n/a   
 
 
-
 
NC_008528  OEOE_1165  RNase H-like ribonuclease  31.16 
 
 		 144 aa  72.8  0.000000000001  Oenococcus oeni PSU-1  Bacteria  normal  0.345189  n/a   
 
 
-
 
NC_013171  Apre_0938  Holliday junction resolvase YqgF  25 
 
 		 139 aa  72.8  0.000000000002  Anaerococcus prevotii DSM 20548  Bacteria  normal  1  n/a   
 
 
-
 
NC_012917  PC1_3713  Holliday junction resolvase-like protein  30.08 
 
 		 139 aa  72.8  0.000000000002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0641904  n/a   
 
 
-
 
NC_013411  GYMC61_0964  Holliday junction resolvase YqgF  31.39 
 
 		 138 aa  72  0.000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013530  Xcel_1690  Holliday junction resolvase YqgF  35.21 
 
 		 184 aa  72.4  0.000000000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.480738  n/a   
 
 
-
 
NC_009921  Franean1_1695  Holliday junction resolvase-like protein  32.84 
 
 		 188 aa  71.6  0.000000000003  Frankia sp. EAN1pec  Bacteria  normal  0.0458229  normal  0.165399 
 
 
-
 
NC_010001  Cphy_2297  Holliday junction resolvase YqgF  31.91 
 
 		 150 aa  72  0.000000000003  Clostridium phytofermentans ISDg  Bacteria  normal  0.470334  n/a   
 
 
-
 
NC_007954  Sden_2673  Holliday junction resolvase-like protein  31.11 
 
 		 141 aa  71.6  0.000000000003  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000201914  n/a   
 
 
-
 
NC_013421  Pecwa_3911  Holliday junction resolvase-like protein  29.85 
 
 		 139 aa  71.6  0.000000000004  Pectobacterium wasabiae WPP163  Bacteria  normal  0.0877728  n/a   
 
 
-
 
NC_009783  VIBHAR_03575  Holliday junction resolvase-like protein  31.34 
 
 		 136 aa  71.2  0.000000000004  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008740  Maqu_3763  Holliday junction resolvase YqgF  31.34 
 
 		 143 aa  71.6  0.000000000004  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_007404  Tbd_2580  Holliday junction resolvase-like protein  31.11 
 
 		 145 aa  71.2  0.000000000005  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  0.0863234 
 
 
-
 
NC_012912  Dd1591_0500  Holliday junction resolvase-like protein  28.68 
 
 		 143 aa  71.2  0.000000000005  Dickeya zeae Ech1591  Bacteria  normal  0.23587  n/a   
 
 
-
 
NC_007963  Csal_0059  Holliday junction resolvase-like protein  32.31 
 
 		 148 aa  71.2  0.000000000005  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_012880  Dd703_0543  Holliday junction resolvase-like protein  29.32 
 
 		 139 aa  71.2  0.000000000005  Dickeya dadantii Ech703  Bacteria  normal  0.0491649  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0474  Holliday junction resolvase YqgF  34.31 
 
 		 145 aa  70.9  0.000000000006  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00800439  n/a   
 
 
-
 
NC_003910  CPS_1251  Holliday junction resolvase-like protein  27.54 
 
 		 148 aa  70.5  0.000000000007  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_013172  Bfae_16350  conserved hypothetical protein TIGR00250  32.64 
 
 		 181 aa  70.5  0.000000000007  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_010831  Cphamn1_2429  Holliday junction resolvase YqgF  33.09 
 
 		 144 aa  70.5  0.000000000007  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010513  Xfasm12_1427  Holliday junction resolvase-like protein  35.34 
 
 		 155 aa  70.5  0.000000000007  Xylella fastidiosa M12  Bacteria  normal  1  n/a   
 
 
-
 
NC_010577  XfasM23_1360  Holliday junction resolvase-like protein  35.34 
 
 		 155 aa  70.5  0.000000000008  Xylella fastidiosa M23  Bacteria  normal  1  n/a   
 
 
-
 
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