279 homologs were found in PanDaTox collection
for query gene Bfae_16350 on replicon NC_013172
Organism: Brachybacterium faecium DSM 4810



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013172  Bfae_16350  conserved hypothetical protein TIGR00250  100 
 
 
181 aa  346  1e-94  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_1819  Holliday junction resolvase YqgF  57.59 
 
 
190 aa  161  4.0000000000000004e-39  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0503115  normal 
 
 
-
 
NC_013595  Sros_6093  endonuclease involved in recombination-like protein  57.75 
 
 
163 aa  142  2e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0746227  normal 
 
 
-
 
NC_012669  Bcav_2015  Holliday junction resolvase YqgF  53.21 
 
 
163 aa  142  2e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.756916  normal  0.07881 
 
 
-
 
NC_011886  Achl_2014  Holliday junction resolvase YqgF  49.38 
 
 
207 aa  140  9e-33  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000330035 
 
 
-
 
NC_013521  Sked_17700  conserved hypothetical protein TIGR00250  55.76 
 
 
167 aa  139  1.9999999999999998e-32  Sanguibacter keddieii DSM 10542  Bacteria  hitchhiker  0.00726332  normal  0.269027 
 
 
-
 
NC_013530  Xcel_1690  Holliday junction resolvase YqgF  56.79 
 
 
184 aa  138  3.9999999999999997e-32  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.480738  n/a   
 
 
-
 
NC_008699  Noca_2408  Holliday junction resolvase-like protein  53.55 
 
 
156 aa  138  3.9999999999999997e-32  Nocardioides sp. JS614  Bacteria  normal  0.332292  n/a   
 
 
-
 
NC_008541  Arth_2277  Holliday junction resolvase YqgF  49.69 
 
 
199 aa  137  7e-32  Arthrobacter sp. FB24  Bacteria  normal  0.117352  n/a   
 
 
-
 
NC_013131  Caci_2379  Holliday junction resolvase-like protein  54.9 
 
 
171 aa  133  1.9999999999999998e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1350  Holliday junction resolvase YqgF  48.19 
 
 
167 aa  133  1.9999999999999998e-30  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3074  Holliday junction resolvase YqgF  47.53 
 
 
161 aa  122  3e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.459764 
 
 
-
 
NC_008578  Acel_1329  Holliday junction resolvase YqgF  45.83 
 
 
173 aa  114  8.999999999999998e-25  Acidothermus cellulolyticus 11B  Bacteria  normal  0.0531797  normal  0.27422 
 
 
-
 
NC_009077  Mjls_2388  Holliday junction resolvase-like protein  49.01 
 
 
169 aa  113  1.0000000000000001e-24  Mycobacterium sp. JLS  Bacteria  normal  normal  0.0472019 
 
 
-
 
NC_008146  Mmcs_2347  Holliday junction resolvase-like protein  49.01 
 
 
169 aa  114  1.0000000000000001e-24  Mycobacterium sp. MCS  Bacteria  normal  0.502005  n/a   
 
 
-
 
NC_008705  Mkms_2394  Holliday junction resolvase-like protein  49.01 
 
 
169 aa  114  1.0000000000000001e-24  Mycobacterium sp. KMS  Bacteria  normal  normal  0.345644 
 
 
-
 
NC_014165  Tbis_2046  Holliday junction resolvase YqgF  50.94 
 
 
163 aa  113  2.0000000000000002e-24  Thermobispora bispora DSM 43833  Bacteria  normal  0.0425259  normal 
 
 
-
 
NC_013441  Gbro_2321  Holliday junction resolvase YqgF  48.97 
 
 
143 aa  108  3e-23  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2136  Holliday junction resolvase YqgF  50.66 
 
 
152 aa  109  3e-23  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000271405  n/a   
 
 
-
 
NC_007777  Francci3_3213  Holliday junction resolvase-like protein  47.95 
 
 
202 aa  108  3e-23  Frankia sp. CcI3  Bacteria  normal  0.0825611  normal 
 
 
-
 
NC_009338  Mflv_3762  Holliday junction resolvase YqgF  45.03 
 
 
175 aa  108  6e-23  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.454353 
 
 
-
 
NC_014158  Tpau_1976  Holliday junction resolvase YqgF  45.27 
 
 
161 aa  107  9.000000000000001e-23  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.133397  n/a   
 
 
-
 
NC_009921  Franean1_1695  Holliday junction resolvase-like protein  47.33 
 
 
188 aa  106  2e-22  Frankia sp. EAN1pec  Bacteria  normal  0.0458229  normal  0.165399 
 
 
-
 
NC_008726  Mvan_2641  Holliday junction resolvase YqgF  47.68 
 
 
175 aa  106  2e-22  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3877  Holliday junction resolvase YqgF  42.57 
 
 
151 aa  105  3e-22  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.843962  normal 
 
 
-
 
NC_013757  Gobs_3157  Holliday junction resolvase YqgF  42.41 
 
 
222 aa  104  7e-22  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.588989  n/a   
 
 
-
 
NC_009380  Strop_1829  Holliday junction resolvase YqgF  46.62 
 
 
153 aa  102  3e-21  Salinispora tropica CNB-440  Bacteria  normal  0.0551936  normal 
 
 
-
 
NC_010655  Amuc_1191  Holliday junction resolvase YqgF  41.48 
 
 
141 aa  102  4e-21  Akkermansia muciniphila ATCC BAA-835  Bacteria  hitchhiker  0.0000237997  normal 
 
 
-
 
NC_009953  Sare_1820  Holliday junction resolvase YqgF  44.59 
 
 
153 aa  101  5e-21  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0000610168 
 
 
-
 
NC_013235  Namu_3296  Holliday junction resolvase YqgF  46.36 
 
 
169 aa  101  6e-21  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000134676  normal  0.0641237 
 
 
-
 
NC_009664  Krad_3031  Holliday junction resolvase YqgF  52.11 
 
 
188 aa  99  3e-20  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_12520  conserved hypothetical protein TIGR00250  44.3 
 
 
161 aa  97.8  8e-20  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.101388  normal  0.418633 
 
 
-
 
NC_007333  Tfu_2069  Holliday junction resolvase-like protein  52.53 
 
 
159 aa  97.4  1e-19  Thermobifida fusca YX  Bacteria  normal  0.0705886  n/a   
 
 
-
 
NC_013517  Sterm_2739  Holliday junction resolvase YqgF  40 
 
 
137 aa  97.1  1e-19  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_0615  putative endonuclease for recombination  42.28 
 
 
152 aa  96.7  2e-19  Bifidobacterium longum DJO10A  Bacteria  normal  0.105236  n/a   
 
 
-
 
NC_013093  Amir_5264  Holliday junction resolvase YqgF  45.14 
 
 
170 aa  94.7  6e-19  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_12575  Holliday junction resolvase-like protein  46.76 
 
 
170 aa  92.4  3e-18  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00396279  normal  0.126571 
 
 
-
 
NC_007947  Mfla_2100  Holliday junction resolvase-like protein  40.14 
 
 
146 aa  89.7  2e-17  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_0153  Holliday junction resolvase-like protein  39.13 
 
 
141 aa  89.4  3e-17  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0185653  n/a   
 
 
-
 
NC_013721  HMPREF0424_0376  RNAse YqgF  38 
 
 
152 aa  88.2  5e-17  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_010320  Teth514_1491  Holliday junction resolvase-like protein  38.85 
 
 
139 aa  87.8  8e-17  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.0000000000748947  n/a   
 
 
-
 
NC_011729  PCC7424_3098  Holliday junction resolvase-like protein  37.86 
 
 
151 aa  86.3  2e-16  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_014248  Aazo_4148  Holliday junction resolvase YqgF  37.5 
 
 
158 aa  84.3  9e-16  'Nostoc azollae' 0708  Bacteria  normal  0.927535  n/a   
 
 
-
 
NC_007413  Ava_3804  Holliday junction resolvase-like protein  36.91 
 
 
151 aa  84.3  9e-16  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0796335  normal 
 
 
-
 
NC_013161  Cyan8802_1969  Holliday junction resolvase-like protein  36.96 
 
 
139 aa  84  0.000000000000001  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.0212683 
 
 
-
 
NC_011726  PCC8801_1942  Holliday junction resolvase-like protein  36.96 
 
 
139 aa  84  0.000000000000001  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013159  Svir_15280  conserved hypothetical protein TIGR00250  45.32 
 
 
154 aa  83.2  0.000000000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0307172  normal  0.652486 
 
 
-
 
NC_013515  Smon_0417  Holliday junction resolvase YqgF  35 
 
 
142 aa  83.2  0.000000000000002  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_008312  Tery_4379  Holliday junction resolvase-like protein  36.23 
 
 
149 aa  82.8  0.000000000000002  Trichodesmium erythraeum IMS101  Bacteria  normal  0.556882  normal  0.251804 
 
 
-
 
NC_008527  LACR_0138  Holliday junction resolvase-like protein  37.23 
 
 
143 aa  83.2  0.000000000000002  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_12710  putative Holliday junction resolvase  43.21 
 
 
189 aa  82.8  0.000000000000003  Micrococcus luteus NCTC 2665  Bacteria  normal  0.84059  n/a   
 
 
-
 
NC_011898  Ccel_2239  Holliday junction resolvase-like protein  34.56 
 
 
142 aa  80.5  0.00000000000001  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.0000140275  n/a   
 
 
-
 
NC_009523  RoseRS_3225  Holliday junction resolvase YqgF  34.78 
 
 
141 aa  80.5  0.00000000000001  Roseiflexus sp. RS-1  Bacteria  normal  0.387387  normal 
 
 
-
 
NC_010001  Cphy_2297  Holliday junction resolvase YqgF  38.41 
 
 
150 aa  79.7  0.00000000000002  Clostridium phytofermentans ISDg  Bacteria  normal  0.470334  n/a   
 
 
-
 
NC_008044  TM1040_0967  Holliday junction resolvase-like protein  37.84 
 
 
157 aa  80.1  0.00000000000002  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_0094  Holliday junction resolvase YqgF  39.29 
 
 
142 aa  78.2  0.00000000000006  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.0018567  normal 
 
 
-
 
NC_013440  Hoch_5401  Holliday junction resolvase YqgF  40.58 
 
 
139 aa  77.8  0.00000000000008  Haliangium ochraceum DSM 14365  Bacteria  normal  0.616966  normal  0.68966 
 
 
-
 
NC_010184  BcerKBAB4_4233  Holliday junction resolvase-like protein  37.41 
 
 
137 aa  77  0.0000000000001  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000272031  n/a   
 
 
-
 
NC_007604  Synpcc7942_2398  Holliday junction resolvase-like protein  32.64 
 
 
149 aa  77  0.0000000000001  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0366153  hitchhiker  0.00151496 
 
 
-
 
NC_008009  Acid345_0556  Holliday junction resolvase YqgF  39.13 
 
 
153 aa  77  0.0000000000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.901255  normal  0.0480752 
 
 
-
 
NC_011666  Msil_0742  Holliday junction resolvase-like protein  35.66 
 
 
161 aa  76.3  0.0000000000002  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0120989 
 
 
-
 
NC_011884  Cyan7425_2514  Holliday junction resolvase-like protein  33.57 
 
 
150 aa  75.9  0.0000000000003  Cyanothece sp. PCC 7425  Bacteria  normal  0.36708  normal 
 
 
-
 
NC_009719  Plav_2841  Holliday junction resolvase YqgF  36.3 
 
 
182 aa  75.5  0.0000000000004  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.636675  normal  0.911101 
 
 
-
 
NC_003909  BCE_4469  Holliday junction resolvase-like protein  36.69 
 
 
137 aa  75.1  0.0000000000005  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.000000240455  n/a   
 
 
-
 
NC_009952  Dshi_1064  Holliday junction resolvase-like protein  37.96 
 
 
163 aa  75.1  0.0000000000005  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.282287  normal 
 
 
-
 
NC_005945  BAS4282  Holliday junction resolvase-like protein  36.69 
 
 
137 aa  75.1  0.0000000000005  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.000000036093  n/a   
 
 
-
 
NC_005957  BT9727_4119  Holliday junction resolvase-like protein  36.69 
 
 
137 aa  75.1  0.0000000000005  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  3.61572e-18  n/a   
 
 
-
 
NC_006274  BCZK4130  Holliday junction resolvase-like protein  36.69 
 
 
137 aa  75.1  0.0000000000005  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000238321  n/a   
 
 
-
 
NC_011773  BCAH820_4466  Holliday junction resolvase-like protein  36.69 
 
 
137 aa  75.1  0.0000000000005  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000283196 
 
 
-
 
NC_007530  GBAA_4614  Holliday junction resolvase-like protein  36.69 
 
 
137 aa  75.1  0.0000000000005  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  decreased coverage  0.0000000000846091  n/a   
 
 
-
 
NC_009484  Acry_0873  Holliday junction resolvase YqgF  38.67 
 
 
158 aa  75.1  0.0000000000005  Acidiphilium cryptum JF-5  Bacteria  normal  0.205729  n/a   
 
 
-
 
NC_007958  RPD_3023  Holliday junction resolvase-like protein  37.41 
 
 
160 aa  75.1  0.0000000000005  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.438725  normal  0.394583 
 
 
-
 
NC_008531  LEUM_0558  Holliday junction resolvase-like protein  36.43 
 
 
143 aa  75.1  0.0000000000005  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_2279  Holliday junction resolvase-like protein  40.43 
 
 
168 aa  74.7  0.0000000000006  Nitrobacter hamburgensis X14  Bacteria  normal  0.273152  n/a   
 
 
-
 
NC_011772  BCG9842_B0730  Holliday junction resolvase-like protein  36.69 
 
 
137 aa  74.7  0.0000000000006  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000542239  normal 
 
 
-
 
NC_012793  GWCH70_2488  Holliday junction resolvase YqgF  37.86 
 
 
138 aa  74.3  0.0000000000008  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000680199  n/a   
 
 
-
 
NC_011658  BCAH187_A4519  Holliday junction resolvase-like protein  37.23 
 
 
137 aa  73.9  0.000000000001  Bacillus cereus AH187  Bacteria  hitchhiker  0.000203205  n/a   
 
 
-
 
NC_011899  Hore_05800  Holliday junction resolvase YqgF  37.06 
 
 
140 aa  73.9  0.000000000001  Halothermothrix orenii H 168  Bacteria  normal  0.209228  n/a   
 
 
-
 
NC_009767  Rcas_3713  Holliday junction resolvase YqgF  34.78 
 
 
146 aa  73.6  0.000000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0658941  hitchhiker  0.00476179 
 
 
-
 
NC_009675  Anae109_2535  Holliday junction resolvase-like protein  38.52 
 
 
137 aa  72.8  0.000000000002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.52249 
 
 
-
 
NC_008261  CPF_2031  Holliday junction resolvase-like protein  31.85 
 
 
137 aa  72.8  0.000000000002  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_1748  Holliday junction resolvase-like protein  31.85 
 
 
137 aa  72.8  0.000000000002  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A4506  Holliday junction resolvase-like protein  37.23 
 
 
137 aa  73.2  0.000000000002  Bacillus cereus B4264  Bacteria  normal  0.860088  n/a   
 
 
-
 
NC_007644  Moth_1640  Holliday junction resolvase YqgF  37.78 
 
 
140 aa  72.4  0.000000000003  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.278901  normal  0.163549 
 
 
-
 
NC_010730  SYO3AOP1_0474  Holliday junction resolvase YqgF  32.33 
 
 
145 aa  72  0.000000000004  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00800439  n/a   
 
 
-
 
NC_009972  Haur_3633  Holliday junction resolvase YqgF  34.56 
 
 
158 aa  71.6  0.000000000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A2479  Holliday junction resolvase-like protein  31.61 
 
 
151 aa  71.6  0.000000000005  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_2684  Holliday junction resolvase-like protein  39.04 
 
 
160 aa  71.6  0.000000000006  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.173322  n/a   
 
 
-
 
NC_009049  Rsph17029_1342  Holliday junction resolvase-like protein  39.04 
 
 
160 aa  71.6  0.000000000006  Rhodobacter sphaeroides ATCC 17029  Bacteria  decreased coverage  0.00888056  normal  0.184568 
 
 
-
 
NC_013525  Tter_0088  Holliday junction resolvase YqgF  37.93 
 
 
149 aa  71.2  0.000000000007  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008686  Pden_0510  Holliday junction resolvase-like protein  37.42 
 
 
158 aa  71.2  0.000000000007  Paracoccus denitrificans PD1222  Bacteria  normal  0.556579  normal 
 
 
-
 
NC_002976  SERP1180  Holliday junction resolvase-like protein  31.88 
 
 
142 aa  70.5  0.00000000001  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_3922  Holliday junction resolvase YqgF  36.69 
 
 
176 aa  70.1  0.00000000001  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_1232  Holliday junction resolvase-like protein  40.74 
 
 
137 aa  70.9  0.00000000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2727  Holliday junction resolvase-like protein  39.26 
 
 
137 aa  70.5  0.00000000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_0458  Holliday junction resolvase YqgF  32.64 
 
 
140 aa  70.5  0.00000000001  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_2580  Holliday junction resolvase-like protein  36.23 
 
 
145 aa  69.3  0.00000000002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.0863234 
 
 
-
 
NC_011004  Rpal_3523  Holliday junction resolvase-like protein  36.69 
 
 
160 aa  70.1  0.00000000002  Rhodopseudomonas palustris TIE-1  Bacteria  hitchhiker  0.00889049  n/a   
 
 
-
 
NC_009487  SaurJH9_1673  Holliday junction resolvase-like protein  31.88 
 
 
142 aa  69.7  0.00000000002  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.514842  n/a   
 
 
-
 
NC_009674  Bcer98_3099  Holliday junction resolvase-like protein  35.25 
 
 
137 aa  69.7  0.00000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00212776  n/a   
 
 
-
 
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