Gene PCC8801_1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_1942 
Symbol 
ID7102890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp2019954 
End bp2020373 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content46% 
IMG OID643475004 
ProductHolliday junction resolvase-like protein 
Protein accessionYP_002372136 
Protein GI218246765 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCGAA TTTCAGCCCT AGGGTTAGAC ATTGGAAAAA AGCGCATTGG AGTAGCCGGG 
TGCGACGGGA CAGGCTTGAT TGCTACGGGG TTAACCACGA TTGAGCGTAC CTCATTTCAG
TCGGATGTGG AACAATTACA CCAATGGGTT AAGGAACGAG AAGCCCAAAT TTTAGTCGTC
GGACTTCCCT ATTCCATGGA TGGTTCATTG GGATTTCAAG CCAAACAAGT CCAAAAGTTT
ACCCGACGTA TTTCTCACGT TTTACAATTA CCCGTGGAAT ATGTGGATGA ACGCTTAACA
TCGGTTGAAG CGGAAGCTCA ATTAAAGTCT CAAAAACGCT TTTCGACTTG GGATAAAGGG
GCAATTGATC GTCAGGCTGC CACGATTATT TTACAACAAT GGTTAGATTC CCGCCGCTAG
 
Protein sequence
MERISALGLD IGKKRIGVAG CDGTGLIATG LTTIERTSFQ SDVEQLHQWV KEREAQILVV 
GLPYSMDGSL GFQAKQVQKF TRRISHVLQL PVEYVDERLT SVEAEAQLKS QKRFSTWDKG
AIDRQAATII LQQWLDSRR