Gene Noca_2408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2408 
Symbol 
ID4599508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp2569007 
End bp2569477 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content76% 
IMG OID639777011 
ProductHolliday junction resolvase-like protein 
Protein accessionYP_923600 
Protein GI119716635 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.332292 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGCCG GCGTGCGGAT CGGCATCGAC CCCGGCGACG CCCGCATCGG GGTTGCCCGC 
AGCGACCCGT CGGGGTTCCT CGCCACCCCG GTGGAGACGG TGCGTCGGGG GAAGGGCGAC 
CTCGCGAGGA TCGGCCGGAT CCTTGCCGCC GAGGAGGACG AGGGCGCCAC CGTCCTGGAG 
GTGGTCGTCG GGCTGCCACG CTCGCTGTCC GGCCGCGAGG GCCCGGCGGC GGCCAAGGTC 
CGGGAGTTCG CCGGCCGGCT GGCGGCGCGG GTCGCGCCGG TGCCGGTGCG CCTGGTCGAC 
GAGCGCATGA CCACGGTGTC CGCTGAGGCT ATGCTGCGCG ACCAGGGCCG CACGGGGGGC 
AAGCGGCGAG CCGTCGTCGA CCAGGCAGCA GCCGTCCTGA TCCTGCAGCA CGCACTGGAC 
ACCGAACGCG CGACGGGGGC CGCGCCGGGC GAGATCGTCG AGGAGACGTA G
 
Protein sequence
MRAGVRIGID PGDARIGVAR SDPSGFLATP VETVRRGKGD LARIGRILAA EEDEGATVLE 
VVVGLPRSLS GREGPAAAKV REFAGRLAAR VAPVPVRLVD ERMTTVSAEA MLRDQGRTGG 
KRRAVVDQAA AVLILQHALD TERATGAAPG EIVEET