208 homologs were found in PanDaTox collection
for query gene Jden_1350 on replicon NC_013174
Organism: Jonesia denitrificans DSM 20603



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013174  Jden_1350  Holliday junction resolvase YqgF  100 
 
 		 167 aa  327  4e-89  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014151  Cfla_1819  Holliday junction resolvase YqgF  54.27 
 
 		 190 aa  149  3e-35  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0503115  normal  1 
 
 
-
 
NC_013530  Xcel_1690  Holliday junction resolvase YqgF  49.7 
 
 		 184 aa  139  9.999999999999999e-33  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.480738  n/a   
 
 
-
 
NC_013521  Sked_17700  conserved hypothetical protein TIGR00250  54.32 
 
 		 167 aa  139  1.9999999999999998e-32  Sanguibacter keddieii DSM 10542  Bacteria  hitchhiker  0.00726332  normal  0.269027 
 
 
-
 
NC_013172  Bfae_16350  conserved hypothetical protein TIGR00250  48.19 
 
 		 181 aa  133  9.999999999999999e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_2015  Holliday junction resolvase YqgF  49.06 
 
 		 163 aa  130  7.999999999999999e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.756916  normal  0.07881 
 
 
-
 
NC_013595  Sros_6093  endonuclease involved in recombination-like protein  45 
 
 		 163 aa  122  3e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0746227  normal  1 
 
 
-
 
NC_009380  Strop_1829  Holliday junction resolvase YqgF  46.5 
 
 		 153 aa  121  4e-27  Salinispora tropica CNB-440  Bacteria  normal  0.0551936  normal  1 
 
 
-
 
NC_009953  Sare_1820  Holliday junction resolvase YqgF  46.5 
 
 		 153 aa  120  7e-27  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.0000610168 
 
 
-
 
NC_008541  Arth_2277  Holliday junction resolvase YqgF  45.51 
 
 		 199 aa  119  9.999999999999999e-27  Arthrobacter sp. FB24  Bacteria  normal  0.117352  n/a   
 
 
-
 
NC_009921  Franean1_1695  Holliday junction resolvase-like protein  47.02 
 
 		 188 aa  115  3e-25  Frankia sp. EAN1pec  Bacteria  normal  0.0458229  normal  0.165399 
 
 
-
 
NC_013131  Caci_2379  Holliday junction resolvase-like protein  47.31 
 
 		 171 aa  113  1.0000000000000001e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011886  Achl_2014  Holliday junction resolvase YqgF  43.11 
 
 		 207 aa  113  1.0000000000000001e-24  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000330035 
 
 
-
 
NC_007777  Francci3_3213  Holliday junction resolvase-like protein  47.13 
 
 		 202 aa  110  7.000000000000001e-24  Frankia sp. CcI3  Bacteria  normal  0.0825611  normal  1 
 
 
-
 
NC_008726  Mvan_2641  Holliday junction resolvase YqgF  46.75 
 
 		 175 aa  109  2.0000000000000002e-23  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009565  TBFG_12575  Holliday junction resolvase-like protein  44.72 
 
 		 170 aa  108  3e-23  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00396279  normal  0.126571 
 
 
-
 
NC_013947  Snas_3877  Holliday junction resolvase YqgF  44.74 
 
 		 151 aa  107  5e-23  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.843962  normal  1 
 
 
-
 
NC_014165  Tbis_2046  Holliday junction resolvase YqgF  45.34 
 
 		 163 aa  105  2e-22  Thermobispora bispora DSM 43833  Bacteria  normal  0.0425259  normal  1 
 
 
-
 
NC_014158  Tpau_1976  Holliday junction resolvase YqgF  45.62 
 
 		 161 aa  105  3e-22  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.133397  n/a   
 
 
-
 
NC_009338  Mflv_3762  Holliday junction resolvase YqgF  45.1 
 
 		 175 aa  105  4e-22  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.454353 
 
 
-
 
NC_008578  Acel_1329  Holliday junction resolvase YqgF  43.12 
 
 		 173 aa  104  7e-22  Acidothermus cellulolyticus 11B  Bacteria  normal  0.0531797  normal  0.27422 
 
 
-
 
NC_013441  Gbro_2321  Holliday junction resolvase YqgF  48.68 
 
 		 143 aa  103  1e-21  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008146  Mmcs_2347  Holliday junction resolvase-like protein  41.56 
 
 		 169 aa  103  1e-21  Mycobacterium sp. MCS  Bacteria  normal  0.502005  n/a   
 
 
-
 
NC_008705  Mkms_2394  Holliday junction resolvase-like protein  41.56 
 
 		 169 aa  103  1e-21  Mycobacterium sp. KMS  Bacteria  normal  1  normal  0.345644 
 
 
-
 
NC_009077  Mjls_2388  Holliday junction resolvase-like protein  41.56 
 
 		 169 aa  102  3e-21  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.0472019 
 
 
-
 
NC_008699  Noca_2408  Holliday junction resolvase-like protein  41.98 
 
 		 156 aa  100  7e-21  Nocardioides sp. JS614  Bacteria  normal  0.332292  n/a   
 
 
-
 
NC_014210  Ndas_3074  Holliday junction resolvase YqgF  40.72 
 
 		 161 aa  99  2e-20  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.459764 
 
 
-
 
NC_013169  Ksed_12520  conserved hypothetical protein TIGR00250  48.08 
 
 		 161 aa  99.4  2e-20  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.101388  normal  0.418633 
 
 
-
 
NC_009664  Krad_3031  Holliday junction resolvase YqgF  46 
 
 		 188 aa  96.7  1e-19  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013757  Gobs_3157  Holliday junction resolvase YqgF  43.54 
 
 		 222 aa  97.1  1e-19  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.588989  n/a   
 
 
-
 
NC_013093  Amir_5264  Holliday junction resolvase YqgF  46 
 
 		 170 aa  95.1  4e-19  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_3296  Holliday junction resolvase YqgF  44.3 
 
 		 169 aa  90.1  1e-17  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000134676  normal  0.0641237 
 
 
-
 
NC_013510  Tcur_2136  Holliday junction resolvase YqgF  42.33 
 
 		 152 aa  88.6  3e-17  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000271405  n/a   
 
 
-
 
NC_013159  Svir_15280  conserved hypothetical protein TIGR00250  42.21 
 
 		 154 aa  86.3  2e-16  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0307172  normal  0.652486 
 
 
-
 
NC_010655  Amuc_1191  Holliday junction resolvase YqgF  34.48 
 
 		 141 aa  84.7  6e-16  Akkermansia muciniphila ATCC BAA-835  Bacteria  hitchhiker  0.0000237997  normal  1 
 
 
-
 
NC_011729  PCC7424_3098  Holliday junction resolvase-like protein  33.56 
 
 		 151 aa  80.5  0.00000000000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_010816  BLD_0615  putative endonuclease for recombination  35 
 
 		 152 aa  80.1  0.00000000000001  Bifidobacterium longum DJO10A  Bacteria  normal  0.105236  n/a   
 
 
-
 
NC_007333  Tfu_2069  Holliday junction resolvase-like protein  42.26 
 
 		 159 aa  79  0.00000000000003  Thermobifida fusca YX  Bacteria  normal  0.0705886  n/a   
 
 
-
 
NC_012803  Mlut_12710  putative Holliday junction resolvase  43.98 
 
 		 189 aa  79  0.00000000000003  Micrococcus luteus NCTC 2665  Bacteria  normal  0.84059  n/a   
 
 
-
 
NC_013161  Cyan8802_1969  Holliday junction resolvase-like protein  32.65 
 
 		 139 aa  78.6  0.00000000000004  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  0.0212683 
 
 
-
 
NC_011726  PCC8801_1942  Holliday junction resolvase-like protein  32.65 
 
 		 139 aa  78.6  0.00000000000004  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011884  Cyan7425_2514  Holliday junction resolvase-like protein  35.1 
 
 		 150 aa  77.4  0.00000000000009  Cyanothece sp. PCC 7425  Bacteria  normal  0.36708  normal  1 
 
 
-
 
NC_009012  Cthe_0153  Holliday junction resolvase-like protein  30.87 
 
 		 141 aa  77  0.0000000000001  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0185653  n/a   
 
 
-
 
NC_013721  HMPREF0424_0376  RNAse YqgF  32.92 
 
 		 152 aa  74.7  0.0000000000005  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  1 
 
 
-
 
NC_008312  Tery_4379  Holliday junction resolvase-like protein  33.33 
 
 		 149 aa  73.6  0.000000000001  Trichodesmium erythraeum IMS101  Bacteria  normal  0.556882  normal  0.251804 
 
 
-
 
NC_008527  LACR_0138  Holliday junction resolvase-like protein  34.48 
 
 		 143 aa  72.8  0.000000000002  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  1  n/a   
 
 
-
 
NC_013171  Apre_0938  Holliday junction resolvase YqgF  29.93 
 
 		 139 aa  72.4  0.000000000003  Anaerococcus prevotii DSM 20548  Bacteria  normal  1  n/a   
 
 
-
 
NC_014248  Aazo_4148  Holliday junction resolvase YqgF  33.12 
 
 		 158 aa  71.6  0.000000000005  'Nostoc azollae' 0708  Bacteria  normal  0.927535  n/a   
 
 
-
 
NC_013515  Smon_0417  Holliday junction resolvase YqgF  30.2 
 
 		 142 aa  70.5  0.00000000001  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_3804  Holliday junction resolvase-like protein  32.64 
 
 		 151 aa  70.5  0.00000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0796335  normal  1 
 
 
-
 
NC_013517  Sterm_2739  Holliday junction resolvase YqgF  31.76 
 
 		 137 aa  70.5  0.00000000001  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_009720  Xaut_3922  Holliday junction resolvase YqgF  35.37 
 
 		 176 aa  70.5  0.00000000001  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008531  LEUM_0558  Holliday junction resolvase-like protein  33.33 
 
 		 143 aa  68.6  0.00000000004  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  1  n/a   
 
 
-
 
NC_007958  RPD_3023  Holliday junction resolvase-like protein  34.67 
 
 		 160 aa  68.2  0.00000000005  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.438725  normal  0.394583 
 
 
-
 
NC_008530  LGAS_0423  Holliday junction resolvase-like protein  35.33 
 
 		 143 aa  67.4  0.00000000008  Lactobacillus gasseri ATCC 33323  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007604  Synpcc7942_2398  Holliday junction resolvase-like protein  31.82 
 
 		 149 aa  67.4  0.00000000009  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0366153  hitchhiker  0.00151496 
 
 
-
 
NC_008261  CPF_2031  Holliday junction resolvase-like protein  29.17 
 
 		 137 aa  67  0.0000000001  Clostridium perfringens ATCC 13124  Bacteria  normal  1  n/a   
 
 
-
 
NC_008262  CPR_1748  Holliday junction resolvase-like protein  29.17 
 
 		 137 aa  67  0.0000000001  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_2528  Holliday junction resolvase-like protein  27.52 
 
 		 138 aa  66.6  0.0000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  0.551236  n/a   
 
 
-
 
NC_013061  Phep_0074  Holliday junction resolvase YqgF  26.85 
 
 		 138 aa  66.2  0.0000000002  Pedobacter heparinus DSM 2366  Bacteria  normal  0.974882  normal  1 
 
 
-
 
NC_009513  Lreu_0535  Holliday junction resolvase-like protein  28.67 
 
 		 147 aa  66.6  0.0000000002  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000331559  n/a   
 
 
-
 
NC_013173  Dbac_1790  Holliday junction resolvase YqgF  33.79 
 
 		 133 aa  65.9  0.0000000003  Desulfomicrobium baculatum DSM 4028  Bacteria  decreased coverage  0.00751815  n/a   
 
 
-
 
NC_013525  Tter_0088  Holliday junction resolvase YqgF  34 
 
 		 149 aa  65.1  0.0000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_014230  CA2559_06155  Holliday junction resolvase-like protein  26.71 
 
 		 135 aa  64.7  0.0000000005  Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_1903  Holliday junction resolvase YqgF  27.21 
 
 		 136 aa  64.7  0.0000000006  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010718  Nther_1778  Holliday junction resolvase YqgF  31.72 
 
 		 141 aa  64.7  0.0000000006  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  0.140554 
 
 
-
 
NC_002976  SERP1180  Holliday junction resolvase-like protein  28.28 
 
 		 142 aa  64.3  0.0000000008  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011004  Rpal_3523  Holliday junction resolvase-like protein  36.67 
 
 		 160 aa  64.3  0.0000000008  Rhodopseudomonas palustris TIE-1  Bacteria  hitchhiker  0.00889049  n/a   
 
 
-
 
NC_011145  AnaeK_2633  Holliday junction resolvase-like protein  38.1 
 
 		 137 aa  64.3  0.0000000008  Anaeromyxobacter sp. K  Bacteria  normal  0.854397  n/a   
 
 
-
 
NC_011891  A2cp1_2727  Holliday junction resolvase-like protein  38.1 
 
 		 137 aa  63.9  0.000000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007964  Nham_2279  Holliday junction resolvase-like protein  36 
 
 		 168 aa  63.9  0.000000001  Nitrobacter hamburgensis X14  Bacteria  normal  0.273152  n/a   
 
 
-
 
NC_008009  Acid345_0556  Holliday junction resolvase YqgF  31.94 
 
 		 153 aa  63.5  0.000000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.901255  normal  0.0480752 
 
 
-
 
NC_008347  Mmar10_1708  Holliday junction resolvase YqgF  32.65 
 
 		 151 aa  63.5  0.000000001  Maricaulis maris MCS10  Bacteria  normal  1  normal  0.180151 
 
 
-
 
NC_012793  GWCH70_2488  Holliday junction resolvase YqgF  31.97 
 
 		 138 aa  63.2  0.000000002  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000680199  n/a   
 
 
-
 
NC_007493  RSP_2684  Holliday junction resolvase-like protein  33.12 
 
 		 160 aa  62  0.000000004  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.173322  n/a   
 
 
-
 
NC_007778  RPB_2429  Holliday junction resolvase-like protein  33.33 
 
 		 160 aa  62  0.000000004  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.0446184 
 
 
-
 
NC_009049  Rsph17029_1342  Holliday junction resolvase-like protein  33.12 
 
 		 160 aa  62  0.000000004  Rhodobacter sphaeroides ATCC 17029  Bacteria  decreased coverage  0.00888056  normal  0.184568 
 
 
-
 
NC_010730  SYO3AOP1_0474  Holliday junction resolvase YqgF  28.97 
 
 		 145 aa  61.6  0.000000005  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00800439  n/a   
 
 
-
 
NC_009428  Rsph17025_1879  Holliday junction resolvase-like protein  32.03 
 
 		 160 aa  61.6  0.000000005  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.620593  normal  1 
 
 
-
 
NC_013223  Dret_1130  Holliday junction resolvase YqgF  34.03 
 
 		 142 aa  61.2  0.000000006  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007947  Mfla_2100  Holliday junction resolvase-like protein  30.26 
 
 		 146 aa  61.2  0.000000006  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007406  Nwi_2004  Holliday junction resolvase-like protein  34.21 
 
 		 163 aa  61.2  0.000000007  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.166059  normal  0.662003 
 
 
-
 
NC_008255  CHU_0692  Holliday junction resolvase-like protein  25.33 
 
 		 152 aa  60.8  0.000000009  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  1  normal  0.458381 
 
 
-
 
NC_013162  Coch_1395  Holliday junction resolvase YqgF  25.95 
 
 		 143 aa  60.8  0.000000009  Capnocytophaga ochracea DSM 7271  Bacteria  normal  1  n/a   
 
 
-
 
NC_010320  Teth514_1491  Holliday junction resolvase-like protein  28.86 
 
 		 139 aa  60.5  0.00000001  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.0000000000748947  n/a   
 
 
-
 
NC_013522  Taci_1032  Holliday junction resolvase YqgF  25.85 
 
 		 142 aa  60.5  0.00000001  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_1232  Holliday junction resolvase-like protein  35.42 
 
 		 137 aa  60.1  0.00000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_008346  Swol_0470  Holliday junction resolvase YqgF  29.66 
 
 		 141 aa  60.5  0.00000001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.00000000599692  n/a   
 
 
-
 
NC_008686  Pden_0510  Holliday junction resolvase-like protein  29.53 
 
 		 158 aa  60.5  0.00000001  Paracoccus denitrificans PD1222  Bacteria  normal  0.556579  normal  1 
 
 
-
 
NC_013037  Dfer_4051  Holliday junction resolvase YqgF  28.19 
 
 		 137 aa  60.1  0.00000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  hitchhiker  0.00000789262 
 
 
-
 
NC_009972  Haur_3633  Holliday junction resolvase YqgF  30.61 
 
 		 158 aa  60.5  0.00000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009487  SaurJH9_1673  Holliday junction resolvase-like protein  28.28 
 
 		 142 aa  60.1  0.00000001  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.514842  n/a   
 
 
-
 
NC_009632  SaurJH1_1707  Holliday junction resolvase-like protein  28.28 
 
 		 142 aa  60.1  0.00000001  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.24342  n/a   
 
 
-
 
NC_009767  Rcas_3713  Holliday junction resolvase YqgF  29.53 
 
 		 146 aa  60.1  0.00000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0658941  hitchhiker  0.00476179 
 
 
-
 
NC_011898  Ccel_2239  Holliday junction resolvase-like protein  27.08 
 
 		 142 aa  59.3  0.00000002  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.0000140275  n/a   
 
 
-
 
NC_008528  OEOE_1165  RNase H-like ribonuclease  30.67 
 
 		 144 aa  59.7  0.00000002  Oenococcus oeni PSU-1  Bacteria  normal  0.345189  n/a   
 
 
-
 
NC_009485  BBta_4721  Holliday junction resolvase-like protein  34 
 
 		 161 aa  60.1  0.00000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013216  Dtox_2265  Holliday junction resolvase YqgF  31.72 
 
 		 139 aa  58.9  0.00000003  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  hitchhiker  0.0000233904 
 
 
-
 
NC_010184  BcerKBAB4_4233  Holliday junction resolvase-like protein  30.14 
 
 		 137 aa  58.9  0.00000003  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000272031  n/a   
 
 
-
 
NC_013203  Apar_0458  Holliday junction resolvase YqgF  31.33 
 
 		 140 aa  58.5  0.00000004  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  1 
 
 
-
 
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