More than 300 homologs were found in PanDaTox collection
for query gene Dret_1130 on replicon NC_013223
Organism: Desulfohalobium retbaense DSM 5692



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013223  Dret_1130  Holliday junction resolvase YqgF  100 
 
 
142 aa  283  5.999999999999999e-76  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1790  Holliday junction resolvase YqgF  52.24 
 
 
133 aa  139  9.999999999999999e-33  Desulfomicrobium baculatum DSM 4028  Bacteria  decreased coverage  0.00751815  n/a   
 
 
-
 
NC_007519  Dde_0314  Holliday junction resolvase YqgF  50 
 
 
144 aa  120  7e-27  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0307  Holliday junction resolvase YqgF  45.86 
 
 
142 aa  115  3e-25  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_0031  Holliday junction resolvase YqgF  53.33 
 
 
140 aa  113  1.0000000000000001e-24  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2352  Holliday junction resolvase YqgF  48.48 
 
 
142 aa  110  1.0000000000000001e-23  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.209159 
 
 
-
 
NC_013757  Gobs_3157  Holliday junction resolvase YqgF  36.15 
 
 
222 aa  91.7  3e-18  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.588989  n/a   
 
 
-
 
NC_010718  Nther_1778  Holliday junction resolvase YqgF  34.85 
 
 
141 aa  90.1  8e-18  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.140554 
 
 
-
 
NC_010320  Teth514_1491  Holliday junction resolvase-like protein  37.04 
 
 
139 aa  90.1  1e-17  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.0000000000748947  n/a   
 
 
-
 
NC_008009  Acid345_0556  Holliday junction resolvase YqgF  37.4 
 
 
153 aa  88.6  3e-17  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.901255  normal  0.0480752 
 
 
-
 
NC_007644  Moth_1640  Holliday junction resolvase YqgF  34.85 
 
 
140 aa  87.4  7e-17  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.278901  normal  0.163549 
 
 
-
 
NC_007947  Mfla_2100  Holliday junction resolvase-like protein  36.43 
 
 
146 aa  87  7e-17  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_2535  Holliday junction resolvase-like protein  35.61 
 
 
137 aa  87  8e-17  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.52249 
 
 
-
 
NC_008346  Swol_0470  Holliday junction resolvase YqgF  32.59 
 
 
141 aa  86.7  9e-17  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.00000000599692  n/a   
 
 
-
 
NC_011729  PCC7424_3098  Holliday junction resolvase-like protein  38.76 
 
 
151 aa  86.7  1e-16  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007413  Ava_3804  Holliday junction resolvase-like protein  34.88 
 
 
151 aa  85.9  2e-16  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0796335  normal 
 
 
-
 
NC_008530  LGAS_0423  Holliday junction resolvase-like protein  36.03 
 
 
143 aa  85.5  2e-16  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_0775  Holliday junction resolvase YqgF  34.07 
 
 
137 aa  84.7  4e-16  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000000463594  n/a   
 
 
-
 
NC_008726  Mvan_2641  Holliday junction resolvase YqgF  39.85 
 
 
175 aa  84.7  4e-16  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_4379  Holliday junction resolvase-like protein  31.01 
 
 
149 aa  84.3  5e-16  Trichodesmium erythraeum IMS101  Bacteria  normal  0.556882  normal  0.251804 
 
 
-
 
NC_008527  LACR_0138  Holliday junction resolvase-like protein  36.09 
 
 
143 aa  84  7e-16  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3562  Holliday junction resolvase-like protein  34.09 
 
 
142 aa  84  7e-16  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000000000000329746  n/a   
 
 
-
 
NC_011761  AFE_3061  hypothetical protein  34.85 
 
 
143 aa  83.6  9e-16  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_2668  Holliday junction resolvase YqgF  34.85 
 
 
143 aa  83.6  9e-16  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.933138  normal 
 
 
-
 
NC_012669  Bcav_2015  Holliday junction resolvase YqgF  38.93 
 
 
163 aa  83.2  0.000000000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.756916  normal  0.07881 
 
 
-
 
NC_009338  Mflv_3762  Holliday junction resolvase YqgF  40.6 
 
 
175 aa  82.8  0.000000000000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.454353 
 
 
-
 
NC_011884  Cyan7425_2514  Holliday junction resolvase-like protein  34.11 
 
 
150 aa  82.4  0.000000000000002  Cyanothece sp. PCC 7425  Bacteria  normal  0.36708  normal 
 
 
-
 
NC_007298  Daro_3892  Holliday junction resolvase-like protein  37.4 
 
 
146 aa  82.4  0.000000000000002  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_4148  Holliday junction resolvase YqgF  34.11 
 
 
158 aa  81.6  0.000000000000003  'Nostoc azollae' 0708  Bacteria  normal  0.927535  n/a   
 
 
-
 
NC_013721  HMPREF0424_0376  RNAse YqgF  35.53 
 
 
152 aa  81.6  0.000000000000003  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_010508  Bcenmc03_0836  Holliday junction resolvase-like protein  34.88 
 
 
149 aa  81.6  0.000000000000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.311364  hitchhiker  0.00221177 
 
 
-
 
NC_013161  Cyan8802_1969  Holliday junction resolvase-like protein  33.82 
 
 
139 aa  81.6  0.000000000000003  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.0212683 
 
 
-
 
NC_008060  Bcen_0383  Holliday junction resolvase-like protein  34.88 
 
 
149 aa  81.6  0.000000000000003  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_1942  Holliday junction resolvase-like protein  33.82 
 
 
139 aa  81.6  0.000000000000003  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008542  Bcen2424_0865  Holliday junction resolvase-like protein  34.88 
 
 
149 aa  81.6  0.000000000000003  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_2388  Holliday junction resolvase-like protein  41.04 
 
 
169 aa  81.3  0.000000000000004  Mycobacterium sp. JLS  Bacteria  normal  normal  0.0472019 
 
 
-
 
NC_011899  Hore_05800  Holliday junction resolvase YqgF  31.06 
 
 
140 aa  80.9  0.000000000000006  Halothermothrix orenii H 168  Bacteria  normal  0.209228  n/a   
 
 
-
 
NC_009719  Plav_2841  Holliday junction resolvase YqgF  35.11 
 
 
182 aa  80.5  0.000000000000007  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.636675  normal  0.911101 
 
 
-
 
NC_008146  Mmcs_2347  Holliday junction resolvase-like protein  41.04 
 
 
169 aa  80.1  0.000000000000008  Mycobacterium sp. MCS  Bacteria  normal  0.502005  n/a   
 
 
-
 
NC_008705  Mkms_2394  Holliday junction resolvase-like protein  41.04 
 
 
169 aa  80.1  0.000000000000008  Mycobacterium sp. KMS  Bacteria  normal  normal  0.345644 
 
 
-
 
NC_007520  Tcr_1828  Holliday junction resolvase YqgF  35.66 
 
 
134 aa  80.1  0.000000000000009  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0755  Holliday junction resolvase-like protein  34.11 
 
 
149 aa  79.3  0.00000000000001  Burkholderia ambifaria MC40-6  Bacteria  normal  0.302865  normal  0.26532 
 
 
-
 
NC_010505  Mrad2831_0475  Holliday junction resolvase YqgF  35.88 
 
 
170 aa  79.7  0.00000000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.437798  normal  0.0955854 
 
 
-
 
NC_010117  COXBURSA331_A2220  Holliday junction resolvase-like protein  34.88 
 
 
141 aa  79.7  0.00000000000001  Coxiella burnetii RSA 331  Bacteria  hitchhiker  0.0000000031992  n/a   
 
 
-
 
NC_009727  CBUD_2194  Holliday junction resolvase-like protein  34.88 
 
 
141 aa  79.7  0.00000000000001  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.401443  n/a   
 
 
-
 
NC_008390  Bamb_0738  Holliday junction resolvase-like protein  34.11 
 
 
149 aa  79.3  0.00000000000001  Burkholderia ambifaria AMMD  Bacteria  normal  0.89107  n/a   
 
 
-
 
NC_009524  PsycPRwf_0143  Holliday junction resolvase YqgF  33.58 
 
 
177 aa  80.1  0.00000000000001  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_0742  Holliday junction resolvase-like protein  35.11 
 
 
161 aa  79  0.00000000000002  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0120989 
 
 
-
 
NC_003909  BCE_4469  Holliday junction resolvase-like protein  33.82 
 
 
137 aa  79.3  0.00000000000002  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.000000240455  n/a   
 
 
-
 
NC_010681  Bphyt_0869  Holliday junction resolvase-like protein  36.43 
 
 
146 aa  79  0.00000000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0747835 
 
 
-
 
NC_005945  BAS4282  Holliday junction resolvase-like protein  33.82 
 
 
137 aa  79.3  0.00000000000002  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.000000036093  n/a   
 
 
-
 
NC_005957  BT9727_4119  Holliday junction resolvase-like protein  33.82 
 
 
137 aa  79.3  0.00000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  3.61572e-18  n/a   
 
 
-
 
NC_006274  BCZK4130  Holliday junction resolvase-like protein  33.82 
 
 
137 aa  79.3  0.00000000000002  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000238321  n/a   
 
 
-
 
NC_007510  Bcep18194_A3963  Holliday junction resolvase-like protein  34.11 
 
 
149 aa  79.3  0.00000000000002  Burkholderia sp. 383  Bacteria  normal  normal  0.539384 
 
 
-
 
NC_007530  GBAA_4614  Holliday junction resolvase-like protein  33.82 
 
 
137 aa  79.3  0.00000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  decreased coverage  0.0000000000846091  n/a   
 
 
-
 
NC_011772  BCG9842_B0730  Holliday junction resolvase-like protein  33.09 
 
 
137 aa  79.3  0.00000000000002  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000542239  normal 
 
 
-
 
NC_011773  BCAH820_4466  Holliday junction resolvase-like protein  33.82 
 
 
137 aa  79.3  0.00000000000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000283196 
 
 
-
 
NC_007951  Bxe_A3810  Holliday junction resolvase-like protein  36.43 
 
 
146 aa  79  0.00000000000002  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_4233  Holliday junction resolvase-like protein  33.09 
 
 
137 aa  79  0.00000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000272031  n/a   
 
 
-
 
NC_008528  OEOE_1165  RNase H-like ribonuclease  36.3 
 
 
144 aa  78.6  0.00000000000002  Oenococcus oeni PSU-1  Bacteria  normal  0.345189  n/a   
 
 
-
 
NC_006368  lpp0637  Holliday junction resolvase-like protein  33.85 
 
 
139 aa  78.6  0.00000000000003  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_010084  Bmul_2523  Holliday junction resolvase-like protein  33.33 
 
 
149 aa  78.6  0.00000000000003  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.159244 
 
 
-
 
NC_008044  TM1040_0967  Holliday junction resolvase-like protein  35.66 
 
 
157 aa  78.6  0.00000000000003  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_1708  Holliday junction resolvase YqgF  35.66 
 
 
151 aa  78.6  0.00000000000003  Maricaulis maris MCS10  Bacteria  normal  normal  0.180151 
 
 
-
 
NC_013441  Gbro_2321  Holliday junction resolvase YqgF  36.84 
 
 
143 aa  77.8  0.00000000000004  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4519  Holliday junction resolvase-like protein  33.58 
 
 
137 aa  78.2  0.00000000000004  Bacillus cereus AH187  Bacteria  hitchhiker  0.000203205  n/a   
 
 
-
 
NC_008261  CPF_2031  Holliday junction resolvase-like protein  31.06 
 
 
137 aa  77.8  0.00000000000004  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_1748  Holliday junction resolvase-like protein  31.06 
 
 
137 aa  77.8  0.00000000000004  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A4506  Holliday junction resolvase-like protein  32.84 
 
 
137 aa  77.8  0.00000000000004  Bacillus cereus B4264  Bacteria  normal  0.860088  n/a   
 
 
-
 
NC_013947  Snas_3877  Holliday junction resolvase YqgF  35.04 
 
 
151 aa  77.8  0.00000000000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.843962  normal 
 
 
-
 
NC_009921  Franean1_1695  Holliday junction resolvase-like protein  38.06 
 
 
188 aa  77.4  0.00000000000006  Frankia sp. EAN1pec  Bacteria  normal  0.0458229  normal  0.165399 
 
 
-
 
NC_011894  Mnod_3314  Holliday junction resolvase YqgF  34.35 
 
 
163 aa  77.4  0.00000000000006  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0964  Holliday junction resolvase YqgF  33.09 
 
 
138 aa  77.4  0.00000000000006  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009012  Cthe_0153  Holliday junction resolvase-like protein  33.09 
 
 
141 aa  77.4  0.00000000000007  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0185653  n/a   
 
 
-
 
NC_007777  Francci3_3213  Holliday junction resolvase-like protein  38.81 
 
 
202 aa  77  0.00000000000008  Frankia sp. CcI3  Bacteria  normal  0.0825611  normal 
 
 
-
 
NC_009674  Bcer98_3099  Holliday junction resolvase-like protein  32.35 
 
 
137 aa  77  0.00000000000008  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00212776  n/a   
 
 
-
 
NC_009565  TBFG_12575  Holliday junction resolvase-like protein  37.88 
 
 
170 aa  77  0.00000000000008  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00396279  normal  0.126571 
 
 
-
 
NC_008686  Pden_0510  Holliday junction resolvase-like protein  34.38 
 
 
158 aa  77  0.00000000000008  Paracoccus denitrificans PD1222  Bacteria  normal  0.556579  normal 
 
 
-
 
NC_010622  Bphy_2326  Holliday junction resolvase-like protein  34.62 
 
 
151 aa  76.6  0.0000000000001  Burkholderia phymatum STM815  Bacteria  normal  normal  0.0635951 
 
 
-
 
NC_009767  Rcas_3713  Holliday junction resolvase YqgF  32.82 
 
 
146 aa  76.3  0.0000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0658941  hitchhiker  0.00476179 
 
 
-
 
NC_007604  Synpcc7942_2398  Holliday junction resolvase-like protein  34.88 
 
 
149 aa  76.6  0.0000000000001  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0366153  hitchhiker  0.00151496 
 
 
-
 
NC_012793  GWCH70_2488  Holliday junction resolvase YqgF  32.35 
 
 
138 aa  76.3  0.0000000000001  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000680199  n/a   
 
 
-
 
NC_010655  Amuc_1191  Holliday junction resolvase YqgF  33.33 
 
 
141 aa  76.3  0.0000000000001  Akkermansia muciniphila ATCC BAA-835  Bacteria  hitchhiker  0.0000237997  normal 
 
 
-
 
NC_006369  lpl0621  Holliday junction resolvase-like protein  33.08 
 
 
139 aa  75.9  0.0000000000002  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_013162  Coch_1395  Holliday junction resolvase YqgF  33.79 
 
 
143 aa  75.5  0.0000000000002  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3225  Holliday junction resolvase YqgF  31.58 
 
 
141 aa  75.9  0.0000000000002  Roseiflexus sp. RS-1  Bacteria  normal  0.387387  normal 
 
 
-
 
NC_003910  CPS_1251  Holliday junction resolvase-like protein  29.46 
 
 
148 aa  75.1  0.0000000000003  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_0059  Holliday junction resolvase-like protein  32.82 
 
 
148 aa  75.1  0.0000000000003  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_3922  Holliday junction resolvase YqgF  37.98 
 
 
176 aa  75.1  0.0000000000003  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_1895  Holliday junction resolvase-like protein  35.11 
 
 
165 aa  74.7  0.0000000000004  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.273411  normal 
 
 
-
 
NC_002950  PG2202  Holliday junction resolvase-like protein  37.31 
 
 
138 aa  74.3  0.0000000000005  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_6093  endonuclease involved in recombination-like protein  33.85 
 
 
163 aa  74.3  0.0000000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0746227  normal 
 
 
-
 
NC_009654  Mmwyl1_0540  Holliday junction resolvase YqgF  32.06 
 
 
156 aa  73.9  0.0000000000006  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_2265  Holliday junction resolvase YqgF  33.08 
 
 
139 aa  73.6  0.0000000000008  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  hitchhiker  0.0000233904 
 
 
-
 
NC_011661  Dtur_1024  Holliday junction resolvase YqgF  31.43 
 
 
141 aa  73.6  0.0000000000009  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_1768  Holliday junction resolvase-like protein  35.04 
 
 
158 aa  73.6  0.0000000000009  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1143  Holliday junction resolvase-like protein  32.56 
 
 
139 aa  73.6  0.000000000001  Shewanella loihica PV-4  Bacteria  normal  0.997205  normal  0.0325702 
 
 
-
 
NC_013093  Amir_5264  Holliday junction resolvase YqgF  38.35 
 
 
170 aa  72.8  0.000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3633  Holliday junction resolvase YqgF  30.08 
 
 
158 aa  72.8  0.000000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_0615  putative endonuclease for recombination  31.51 
 
 
152 aa  73.2  0.000000000001  Bifidobacterium longum DJO10A  Bacteria  normal  0.105236  n/a   
 
 
-
 
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