| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1143 |
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| Symbol | |
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| ID | 4922519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1320077 |
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| End bp | 1320496 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640162678 |
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| Product | Holliday junction resolvase-like protein |
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| Protein accession | YP_001093273 |
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| Protein GI | 127512076 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
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| TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.997205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0325702 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTTCAG CAAGCGTCTT GGGCTTCGAC TTCGGCACCA AGAGCATAGG CGTCGCCATC
GGACAGCAGA TCACCGGCAG CGCCACTCCC CTCGCCTCCC TCAAGGCCAA CGACGGCATC
CCCAGGTGGG AAGAGATAGA GGCGCTTATC CAGGAGTGGA AACCCGACCT TATCGTCGTC
GGCCTGCCCC TCAACATGGA TGGCACAGAG CAGGAGATGA CCCAGCGAGC CCGCAAGTTT
GCCAACCGCA TCAGCGGCCG CTTCGGCGTC AAGACCGCCA CCCAGGATGA ACGTCTCACC
ACAGCCGACG CCAAGGCCAG GCTATTTGAA ATGGGCGGCT ACAAGGCCCT CTCTAAGGGC
CAGGTCGACT CCATGTCGGC GGTACTCATC ATCGAGAGTT ATTTCGAGAA TCTCTACTAA
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| Protein sequence | MSSASVLGFD FGTKSIGVAI GQQITGSATP LASLKANDGI PRWEEIEALI QEWKPDLIVV
GLPLNMDGTE QEMTQRARKF ANRISGRFGV KTATQDERLT TADAKARLFE MGGYKALSKG
QVDSMSAVLI IESYFENLY
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