293 homologs were found in PanDaTox collection
for query gene Ddes_0031 on replicon NC_011883
Organism: Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011883  Ddes_0031  Holliday junction resolvase YqgF  100 
 
 		 140 aa  279  8.000000000000001e-75  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  1  n/a   
 
 
-
 
NC_008751  Dvul_0307  Holliday junction resolvase YqgF  55 
 
 		 142 aa  135  2e-31  Desulfovibrio vulgaris DP4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007519  Dde_0314  Holliday junction resolvase YqgF  54.68 
 
 		 144 aa  134  6.0000000000000005e-31  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  1  n/a   
 
 
-
 
NC_011769  DvMF_2352  Holliday junction resolvase YqgF  57.14 
 
 		 142 aa  133  8e-31  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.209159 
 
 
-
 
NC_013223  Dret_1130  Holliday junction resolvase YqgF  53.33 
 
 		 142 aa  113  1.0000000000000001e-24  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013173  Dbac_1790  Holliday junction resolvase YqgF  46.15 
 
 		 133 aa  98.2  3e-20  Desulfomicrobium baculatum DSM 4028  Bacteria  decreased coverage  0.00751815  n/a   
 
 
-
 
NC_009077  Mjls_2388  Holliday junction resolvase-like protein  40.46 
 
 		 169 aa  83.2  0.000000000000001  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.0472019 
 
 
-
 
NC_008146  Mmcs_2347  Holliday junction resolvase-like protein  40.46 
 
 		 169 aa  82  0.000000000000002  Mycobacterium sp. MCS  Bacteria  normal  0.502005  n/a   
 
 
-
 
NC_008705  Mkms_2394  Holliday junction resolvase-like protein  40.46 
 
 		 169 aa  82  0.000000000000002  Mycobacterium sp. KMS  Bacteria  normal  1  normal  0.345644 
 
 
-
 
NC_007947  Mfla_2100  Holliday junction resolvase-like protein  38.46 
 
 		 146 aa  77  0.00000000000008  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010655  Amuc_1191  Holliday junction resolvase YqgF  35.88 
 
 		 141 aa  75.9  0.0000000000002  Akkermansia muciniphila ATCC BAA-835  Bacteria  hitchhiker  0.0000237997  normal  1 
 
 
-
 
NC_009921  Franean1_1695  Holliday junction resolvase-like protein  37.88 
 
 		 188 aa  74.3  0.0000000000005  Frankia sp. EAN1pec  Bacteria  normal  0.0458229  normal  0.165399 
 
 
-
 
NC_013757  Gobs_3157  Holliday junction resolvase YqgF  37.14 
 
 		 222 aa  73.6  0.0000000000008  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.588989  n/a   
 
 
-
 
NC_013530  Xcel_1690  Holliday junction resolvase YqgF  42.11 
 
 		 184 aa  73.6  0.0000000000009  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.480738  n/a   
 
 
-
 
NC_013947  Snas_3877  Holliday junction resolvase YqgF  35.07 
 
 		 151 aa  71.6  0.000000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.843962  normal  1 
 
 
-
 
NC_008009  Acid345_0556  Holliday junction resolvase YqgF  38.93 
 
 		 153 aa  71.6  0.000000000003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.901255  normal  0.0480752 
 
 
-
 
NC_011206  Lferr_2668  Holliday junction resolvase YqgF  36.43 
 
 		 143 aa  71.2  0.000000000004  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.933138  normal  1 
 
 
-
 
NC_011761  AFE_3061  hypothetical protein  36.43 
 
 		 143 aa  71.2  0.000000000004  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_2535  Holliday junction resolvase-like protein  37.69 
 
 		 137 aa  71.2  0.000000000005  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  0.52249 
 
 
-
 
NC_008578  Acel_1329  Holliday junction resolvase YqgF  38.17 
 
 		 173 aa  70.1  0.000000000009  Acidothermus cellulolyticus 11B  Bacteria  normal  0.0531797  normal  0.27422 
 
 
-
 
NC_012669  Bcav_2015  Holliday junction resolvase YqgF  35.88 
 
 		 163 aa  69.3  0.00000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.756916  normal  0.07881 
 
 
-
 
NC_009338  Mflv_3762  Holliday junction resolvase YqgF  36.64 
 
 		 175 aa  69.3  0.00000000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.454353 
 
 
-
 
NC_007298  Daro_3892  Holliday junction resolvase-like protein  35.38 
 
 		 146 aa  68.6  0.00000000003  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007644  Moth_1640  Holliday junction resolvase YqgF  36.15 
 
 		 140 aa  68.6  0.00000000003  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.278901  normal  0.163549 
 
 
-
 
NC_008530  LGAS_0423  Holliday junction resolvase-like protein  34.85 
 
 		 143 aa  68.6  0.00000000003  Lactobacillus gasseri ATCC 33323  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_2408  Holliday junction resolvase-like protein  38.93 
 
 		 156 aa  68.6  0.00000000003  Nocardioides sp. JS614  Bacteria  normal  0.332292  n/a   
 
 
-
 
NC_011661  Dtur_1024  Holliday junction resolvase YqgF  33.08 
 
 		 141 aa  68.2  0.00000000004  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_3213  Holliday junction resolvase-like protein  35.07 
 
 		 202 aa  68.2  0.00000000004  Frankia sp. CcI3  Bacteria  normal  0.0825611  normal  1 
 
 
-
 
NC_008726  Mvan_2641  Holliday junction resolvase YqgF  38.06 
 
 		 175 aa  67.8  0.00000000004  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009953  Sare_1820  Holliday junction resolvase YqgF  38.81 
 
 		 153 aa  67.8  0.00000000005  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.0000610168 
 
 
-
 
NC_013595  Sros_6093  endonuclease involved in recombination-like protein  33.59 
 
 		 163 aa  67.4  0.00000000007  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0746227  normal  1 
 
 
-
 
NC_013441  Gbro_2321  Holliday junction resolvase YqgF  35.11 
 
 		 143 aa  67  0.00000000009  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009380  Strop_1829  Holliday junction resolvase YqgF  36.96 
 
 		 153 aa  66.6  0.0000000001  Salinispora tropica CNB-440  Bacteria  normal  0.0551936  normal  1 
 
 
-
 
NC_007510  Bcep18194_A3963  Holliday junction resolvase-like protein  34.62 
 
 		 149 aa  65.5  0.0000000002  Burkholderia sp. 383  Bacteria  normal  1  normal  0.539384 
 
 
-
 
NC_009767  Rcas_3713  Holliday junction resolvase YqgF  36.15 
 
 		 146 aa  66.2  0.0000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0658941  hitchhiker  0.00476179 
 
 
-
 
NC_013169  Ksed_12520  conserved hypothetical protein TIGR00250  37.04 
 
 		 161 aa  66.2  0.0000000002  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.101388  normal  0.418633 
 
 
-
 
NC_010508  Bcenmc03_0836  Holliday junction resolvase-like protein  33.85 
 
 		 149 aa  65.1  0.0000000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.311364  hitchhiker  0.00221177 
 
 
-
 
NC_013162  Coch_1395  Holliday junction resolvase YqgF  31.34 
 
 		 143 aa  65.5  0.0000000003  Capnocytophaga ochracea DSM 7271  Bacteria  normal  1  n/a   
 
 
-
 
NC_007404  Tbd_2580  Holliday junction resolvase-like protein  33.85 
 
 		 145 aa  65.1  0.0000000003  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  0.0863234 
 
 
-
 
NC_007514  Cag_0014  Holliday junction resolvase YqgF  37.31 
 
 		 140 aa  65.1  0.0000000003  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.639301  n/a   
 
 
-
 
NC_008060  Bcen_0383  Holliday junction resolvase-like protein  33.85 
 
 		 149 aa  65.1  0.0000000003  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008542  Bcen2424_0865  Holliday junction resolvase-like protein  33.85 
 
 		 149 aa  65.1  0.0000000003  Burkholderia cenocepacia HI2424  Bacteria  normal  1  n/a   
 
 
-
 
NC_010084  Bmul_2523  Holliday junction resolvase-like protein  33.85 
 
 		 149 aa  64.7  0.0000000004  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  0.159244 
 
 
-
 
NC_010551  BamMC406_0755  Holliday junction resolvase-like protein  33.85 
 
 		 149 aa  64.3  0.0000000005  Burkholderia ambifaria MC40-6  Bacteria  normal  0.302865  normal  0.26532 
 
 
-
 
NC_008390  Bamb_0738  Holliday junction resolvase-like protein  33.85 
 
 		 149 aa  64.3  0.0000000005  Burkholderia ambifaria AMMD  Bacteria  normal  0.89107  n/a   
 
 
-
 
NC_009565  TBFG_12575  Holliday junction resolvase-like protein  37.4 
 
 		 170 aa  63.9  0.0000000007  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00396279  normal  0.126571 
 
 
-
 
NC_014165  Tbis_2046  Holliday junction resolvase YqgF  35.61 
 
 		 163 aa  63.9  0.0000000008  Thermobispora bispora DSM 43833  Bacteria  normal  0.0425259  normal  1 
 
 
-
 
NC_013161  Cyan8802_1969  Holliday junction resolvase-like protein  34.81 
 
 		 139 aa  63.5  0.0000000009  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  0.0212683 
 
 
-
 
NC_011726  PCC8801_1942  Holliday junction resolvase-like protein  34.81 
 
 		 139 aa  63.5  0.0000000009  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010511  M446_4344  Holliday junction resolvase YqgF  35 
 
 		 168 aa  63.2  0.000000001  Methylobacterium sp. 4-46  Bacteria  normal  0.892789  normal  0.367855 
 
 
-
 
NC_009012  Cthe_0153  Holliday junction resolvase-like protein  33.59 
 
 		 141 aa  63.2  0.000000001  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0185653  n/a   
 
 
-
 
NC_009428  Rsph17025_1879  Holliday junction resolvase-like protein  34.62 
 
 		 160 aa  63.2  0.000000001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.620593  normal  1 
 
 
-
 
NC_013521  Sked_17700  conserved hypothetical protein TIGR00250  38.69 
 
 		 167 aa  62.8  0.000000002  Sanguibacter keddieii DSM 10542  Bacteria  hitchhiker  0.00726332  normal  0.269027 
 
 
-
 
NC_011884  Cyan7425_2514  Holliday junction resolvase-like protein  33.08 
 
 		 150 aa  62.4  0.000000002  Cyanothece sp. PCC 7425  Bacteria  normal  0.36708  normal  1 
 
 
-
 
NC_008541  Arth_2277  Holliday junction resolvase YqgF  36.84 
 
 		 199 aa  62.4  0.000000002  Arthrobacter sp. FB24  Bacteria  normal  0.117352  n/a   
 
 
-
 
NC_011891  A2cp1_2727  Holliday junction resolvase-like protein  38.17 
 
 		 137 aa  62.4  0.000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011666  Msil_0742  Holliday junction resolvase-like protein  33.85 
 
 		 161 aa  62.4  0.000000002  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0120989 
 
 
-
 
NC_011894  Mnod_3314  Holliday junction resolvase YqgF  33.57 
 
 		 163 aa  62  0.000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_1976  Holliday junction resolvase YqgF  33.56 
 
 		 161 aa  62  0.000000003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.133397  n/a   
 
 
-
 
NC_008312  Tery_4379  Holliday junction resolvase-like protein  29.23 
 
 		 149 aa  62  0.000000003  Trichodesmium erythraeum IMS101  Bacteria  normal  0.556882  normal  0.251804 
 
 
-
 
NC_013159  Svir_15280  conserved hypothetical protein TIGR00250  35.88 
 
 		 154 aa  61.2  0.000000004  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0307172  normal  0.652486 
 
 
-
 
NC_011145  AnaeK_2633  Holliday junction resolvase-like protein  37.4 
 
 		 137 aa  61.2  0.000000004  Anaeromyxobacter sp. K  Bacteria  normal  0.854397  n/a   
 
 
-
 
NC_014230  CA2559_06155  Holliday junction resolvase-like protein  33.08 
 
 		 135 aa  60.8  0.000000005  Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_007614  Nmul_A2479  Holliday junction resolvase-like protein  33.08 
 
 		 151 aa  60.8  0.000000006  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_1232  Holliday junction resolvase-like protein  37.4 
 
 		 137 aa  60.8  0.000000006  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_008347  Mmar10_1708  Holliday junction resolvase YqgF  33.59 
 
 		 151 aa  60.8  0.000000006  Maricaulis maris MCS10  Bacteria  normal  1  normal  0.180151 
 
 
-
 
NC_013093  Amir_5264  Holliday junction resolvase YqgF  36.57 
 
 		 170 aa  60.8  0.000000006  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_007493  RSP_2684  Holliday junction resolvase-like protein  35.38 
 
 		 160 aa  60.5  0.000000007  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.173322  n/a   
 
 
-
 
NC_009049  Rsph17029_1342  Holliday junction resolvase-like protein  35.38 
 
 		 160 aa  60.5  0.000000007  Rhodobacter sphaeroides ATCC 17029  Bacteria  decreased coverage  0.00888056  normal  0.184568 
 
 
-
 
NC_013730  Slin_5430  Holliday junction resolvase YqgF  33.08 
 
 		 142 aa  60.5  0.000000007  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013721  HMPREF0424_0376  RNAse YqgF  30.77 
 
 		 152 aa  60.5  0.000000008  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  1 
 
 
-
 
NC_010831  Cphamn1_2429  Holliday junction resolvase YqgF  33.08 
 
 		 144 aa  60.5  0.000000008  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008044  TM1040_0967  Holliday junction resolvase-like protein  33.59 
 
 		 157 aa  60.1  0.000000009  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013061  Phep_0074  Holliday junction resolvase YqgF  34.33 
 
 		 138 aa  60.1  0.000000009  Pedobacter heparinus DSM 2366  Bacteria  normal  0.974882  normal  1 
 
 
-
 
NC_010622  Bphy_2326  Holliday junction resolvase-like protein  36.64 
 
 		 151 aa  60.1  0.00000001  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.0635951 
 
 
-
 
NC_007520  Tcr_1828  Holliday junction resolvase YqgF  35.61 
 
 		 134 aa  60.1  0.00000001  Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_0475  Holliday junction resolvase YqgF  34.62 
 
 		 170 aa  60.1  0.00000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.437798  normal  0.0955854 
 
 
-
 
NC_013235  Namu_3296  Holliday junction resolvase YqgF  36.62 
 
 		 169 aa  59.7  0.00000001  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000134676  normal  0.0641237 
 
 
-
 
NC_008531  LEUM_0558  Holliday junction resolvase-like protein  34.09 
 
 		 143 aa  59.7  0.00000001  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  1  n/a   
 
 
-
 
NC_010830  Aasi_1327  Holliday junction resolvase-like protein  34.33 
 
 		 141 aa  58.9  0.00000002  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal  0.513618 
 
 
-
 
NC_006368  lpp0637  Holliday junction resolvase-like protein  31.34 
 
 		 139 aa  58.9  0.00000002  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_011898  Ccel_2239  Holliday junction resolvase-like protein  27.69 
 
 		 142 aa  59.3  0.00000002  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.0000140275  n/a   
 
 
-
 
NC_008527  LACR_0138  Holliday junction resolvase-like protein  32.31 
 
 		 143 aa  59.3  0.00000002  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_3225  Holliday junction resolvase YqgF  32.31 
 
 		 141 aa  58.5  0.00000003  Roseiflexus sp. RS-1  Bacteria  normal  0.387387  normal  1 
 
 
-
 
NC_011886  Achl_2014  Holliday junction resolvase YqgF  33.09 
 
 		 207 aa  58.5  0.00000003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000330035 
 
 
-
 
NC_008261  CPF_2031  Holliday junction resolvase-like protein  29.23 
 
 		 137 aa  58.2  0.00000003  Clostridium perfringens ATCC 13124  Bacteria  normal  1  n/a   
 
 
-
 
NC_008262  CPR_1748  Holliday junction resolvase-like protein  29.23 
 
 		 137 aa  58.2  0.00000003  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_010816  BLD_0615  putative endonuclease for recombination  31.72 
 
 		 152 aa  57.8  0.00000004  Bifidobacterium longum DJO10A  Bacteria  normal  0.105236  n/a   
 
 
-
 
NC_007406  Nwi_2004  Holliday junction resolvase-like protein  32.37 
 
 		 163 aa  58.2  0.00000004  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.166059  normal  0.662003 
 
 
-
 
NC_007413  Ava_3804  Holliday junction resolvase-like protein  31.54 
 
 		 151 aa  58.2  0.00000004  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0796335  normal  1 
 
 
-
 
NC_011831  Cagg_0094  Holliday junction resolvase YqgF  34.62 
 
 		 142 aa  58.2  0.00000004  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.0018567  normal  1 
 
 
-
 
NC_013131  Caci_2379  Holliday junction resolvase-like protein  36.36 
 
 		 171 aa  57.8  0.00000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013204  Elen_2554  Holliday junction resolvase YqgF  31.3 
 
 		 138 aa  57.8  0.00000005  Eggerthella lenta DSM 2243  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013165  Shel_07810  conserved hypothetical protein TIGR00250  33.58 
 
 		 138 aa  57.8  0.00000005  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  0.0182311 
 
 
-
 
NC_007778  RPB_2429  Holliday junction resolvase-like protein  33.08 
 
 		 160 aa  57.8  0.00000005  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.0446184 
 
 
-
 
NC_009972  Haur_3633  Holliday junction resolvase YqgF  32.59 
 
 		 158 aa  57.8  0.00000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_008528  OEOE_1165  RNase H-like ribonuclease  33.59 
 
 		 144 aa  57.8  0.00000005  Oenococcus oeni PSU-1  Bacteria  normal  0.345189  n/a   
 
 
-
 
NC_010681  Bphyt_0869  Holliday junction resolvase-like protein  33.85 
 
 		 146 aa  57.8  0.00000005  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  0.0747835 
 
 
-
 
NC_013422  Hneap_1355  Holliday junction resolvase YqgF  32.35 
 
 		 165 aa  57.8  0.00000005  Halothiobacillus neapolitanus c2  Bacteria  normal  1  n/a   
 
 
-
 
NC_007958  RPD_3023  Holliday junction resolvase-like protein  33.59 
 
 		 160 aa  57.4  0.00000006  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.438725  normal  0.394583 
 
 
-
 
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