| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2841 |
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| Symbol | |
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| ID | 5455491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3046311 |
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| End bp | 3046859 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640878422 |
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| Product | Holliday junction resolvase YqgF |
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| Protein accession | YP_001414105 |
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| Protein GI | 154253281 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
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| TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.636675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 0.911101 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGGATAG CCGATTGCGC CGCTCCCGGC CCTCTCCTAT GGTCCGCCCG AACGGGATTT
TTCAAGGAAA GCAATCGCTT GAGCGGCAAT CTGAAGCCTC TTGCGGAACT TAAGGTAGGC
TTGGGCCGCA ACCGGCGCCT GATCGGCGTC GATCTTGGGT CGAAAACCAT CGGCCTCGCC
CTCTCGGACG TCTCCCTTTC GATCGCGAGC CCCCTCGAAA CCATCAGGCG GACGAAGTTC
ACCGCCGATG CCGAACGCCT CATCGCGCTG GCGAAGGAAC ATGACGCCGG CGCCCTCGTC
TTCGGCTTGC CCCTCAACAT GGACGGCACC GAGGGGCCCC GCTGCCAGTC CACCCGCGCC
TTCATCCGCA ATCTCGAAAA GCTGACGGAT CTGCCCATCG CCTTCTGGGA CGAACGCCTC
TCCACCATGG CCGTCACCCG CACCCTGCTC GACGCCGATG CCAGCCGCGC CCGCCGCGCC
GAACTCGTGG ACAAGATGGC CGCCGCCTAC ATCCTGCAGG GCGCGCTCGA CCGCCTGCGG
AAGCTCTGA
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| Protein sequence | MWIADCAAPG PLLWSARTGF FKESNRLSGN LKPLAELKVG LGRNRRLIGV DLGSKTIGLA
LSDVSLSIAS PLETIRRTKF TADAERLIAL AKEHDAGALV FGLPLNMDGT EGPRCQSTRA
FIRNLEKLTD LPIAFWDERL STMAVTRTLL DADASRARRA ELVDKMAAAY ILQGALDRLR
KL
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