More than 300 homologs were found in PanDaTox collection
for query gene Dbac_1790 on replicon NC_013173
Organism: Desulfomicrobium baculatum DSM 4028



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013173  Dbac_1790  Holliday junction resolvase YqgF  100 
 
 		 133 aa  273  8e-73  Desulfomicrobium baculatum DSM 4028  Bacteria  decreased coverage  0.00751815  n/a   
 
 
-
 
NC_013223  Dret_1130  Holliday junction resolvase YqgF  52.24 
 
 		 142 aa  139  9.999999999999999e-33  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007519  Dde_0314  Holliday junction resolvase YqgF  51.52 
 
 		 144 aa  130  6e-30  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  1  n/a   
 
 
-
 
NC_008751  Dvul_0307  Holliday junction resolvase YqgF  50 
 
 		 142 aa  128  3e-29  Desulfovibrio vulgaris DP4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011769  DvMF_2352  Holliday junction resolvase YqgF  50.76 
 
 		 142 aa  119  1.9999999999999998e-26  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.209159 
 
 
-
 
NC_007947  Mfla_2100  Holliday junction resolvase-like protein  41.67 
 
 		 146 aa  106  1e-22  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011883  Ddes_0031  Holliday junction resolvase YqgF  46.15 
 
 		 140 aa  98.2  3e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_2535  Holliday junction resolvase-like protein  36.57 
 
 		 137 aa  88.2  3e-17  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  0.52249 
 
 
-
 
NC_007298  Daro_3892  Holliday junction resolvase-like protein  36.36 
 
 		 146 aa  87.4  6e-17  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_0094  Holliday junction resolvase YqgF  36.64 
 
 		 142 aa  86.7  1e-16  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.0018567  normal  1 
 
 
-
 
NC_009972  Haur_3633  Holliday junction resolvase YqgF  34.59 
 
 		 158 aa  85.1  3e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_1778  Holliday junction resolvase YqgF  36.84 
 
 		 141 aa  84  7e-16  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  0.140554 
 
 
-
 
NC_007413  Ava_3804  Holliday junction resolvase-like protein  35.38 
 
 		 151 aa  82.8  0.000000000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0796335  normal  1 
 
 
-
 
NC_008009  Acid345_0556  Holliday junction resolvase YqgF  34.56 
 
 		 153 aa  81.3  0.000000000000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.901255  normal  0.0480752 
 
 
-
 
NC_011761  AFE_3061  hypothetical protein  39.1 
 
 		 143 aa  80.9  0.000000000000005  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_011206  Lferr_2668  Holliday junction resolvase YqgF  39.1 
 
 		 143 aa  80.9  0.000000000000005  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.933138  normal  1 
 
 
-
 
NC_012669  Bcav_2015  Holliday junction resolvase YqgF  32.82 
 
 		 163 aa  79.7  0.00000000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.756916  normal  0.07881 
 
 
-
 
NC_010655  Amuc_1191  Holliday junction resolvase YqgF  34.59 
 
 		 141 aa  79.7  0.00000000000001  Akkermansia muciniphila ATCC BAA-835  Bacteria  hitchhiker  0.0000237997  normal  1 
 
 
-
 
NC_009092  Shew_1143  Holliday junction resolvase-like protein  34.09 
 
 		 139 aa  78.6  0.00000000000003  Shewanella loihica PV-4  Bacteria  normal  0.997205  normal  0.0325702 
 
 
-
 
NC_006368  lpp0637  Holliday junction resolvase-like protein  33.33 
 
 		 139 aa  77.8  0.00000000000004  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_007644  Moth_1640  Holliday junction resolvase YqgF  35.07 
 
 		 140 aa  77.8  0.00000000000005  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.278901  normal  0.163549 
 
 
-
 
NC_013525  Tter_0088  Holliday junction resolvase YqgF  36.96 
 
 		 149 aa  77  0.00000000000009  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011886  Achl_2014  Holliday junction resolvase YqgF  31.62 
 
 		 207 aa  76.6  0.00000000000009  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000330035 
 
 
-
 
NC_010320  Teth514_1491  Holliday junction resolvase-like protein  34.81 
 
 		 139 aa  76.3  0.0000000000001  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.0000000000748947  n/a   
 
 
-
 
NC_009253  Dred_0775  Holliday junction resolvase YqgF  33.82 
 
 		 137 aa  76.3  0.0000000000001  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000000463594  n/a   
 
 
-
 
NC_009831  Ssed_1236  Holliday junction resolvase-like protein  33.58 
 
 		 139 aa  76.3  0.0000000000001  Shewanella sediminis HAW-EB3  Bacteria  normal  0.578906  normal  0.405452 
 
 
-
 
NC_014248  Aazo_4148  Holliday junction resolvase YqgF  33.85 
 
 		 158 aa  75.9  0.0000000000002  'Nostoc azollae' 0708  Bacteria  normal  0.927535  n/a   
 
 
-
 
NC_011884  Cyan7425_2514  Holliday junction resolvase-like protein  35.88 
 
 		 150 aa  75.9  0.0000000000002  Cyanothece sp. PCC 7425  Bacteria  normal  0.36708  normal  1 
 
 
-
 
NC_006369  lpl0621  Holliday junction resolvase-like protein  32.58 
 
 		 139 aa  75.1  0.0000000000003  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_0540  Holliday junction resolvase YqgF  32.33 
 
 		 156 aa  75.1  0.0000000000003  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008346  Swol_0470  Holliday junction resolvase YqgF  34.07 
 
 		 141 aa  74.7  0.0000000000004  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.00000000599692  n/a   
 
 
-
 
NC_008541  Arth_2277  Holliday junction resolvase YqgF  32.35 
 
 		 199 aa  74.7  0.0000000000004  Arthrobacter sp. FB24  Bacteria  normal  0.117352  n/a   
 
 
-
 
NC_010424  Daud_0915  Holliday junction resolvase YqgF  31.34 
 
 		 141 aa  74.3  0.0000000000005  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.242003  n/a   
 
 
-
 
NC_010551  BamMC406_0755  Holliday junction resolvase-like protein  36.76 
 
 		 149 aa  72.8  0.000000000001  Burkholderia ambifaria MC40-6  Bacteria  normal  0.302865  normal  0.26532 
 
 
-
 
NC_007514  Cag_0014  Holliday junction resolvase YqgF  39.13 
 
 		 140 aa  72.8  0.000000000001  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.639301  n/a   
 
 
-
 
NC_013721  HMPREF0424_0376  RNAse YqgF  30.41 
 
 		 152 aa  72.8  0.000000000001  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  1 
 
 
-
 
NC_007777  Francci3_3213  Holliday junction resolvase-like protein  35.82 
 
 		 202 aa  73.2  0.000000000001  Frankia sp. CcI3  Bacteria  normal  0.0825611  normal  1 
 
 
-
 
NC_011891  A2cp1_2727  Holliday junction resolvase-like protein  33.58 
 
 		 137 aa  72.8  0.000000000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_1336  Holliday junction resolvase-like protein  32.58 
 
 		 139 aa  73.2  0.000000000001  Shewanella woodyi ATCC 51908  Bacteria  normal  0.164432  hitchhiker  0.000378103 
 
 
-
 
NC_008390  Bamb_0738  Holliday junction resolvase-like protein  36.76 
 
 		 149 aa  72.8  0.000000000001  Burkholderia ambifaria AMMD  Bacteria  normal  0.89107  n/a   
 
 
-
 
NC_008530  LGAS_0423  Holliday junction resolvase-like protein  32.37 
 
 		 143 aa  72.8  0.000000000001  Lactobacillus gasseri ATCC 33323  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010816  BLD_0615  putative endonuclease for recombination  30.2 
 
 		 152 aa  73.2  0.000000000001  Bifidobacterium longum DJO10A  Bacteria  normal  0.105236  n/a   
 
 
-
 
NC_011729  PCC7424_3098  Holliday junction resolvase-like protein  31.82 
 
 		 151 aa  72.8  0.000000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_011830  Dhaf_3562  Holliday junction resolvase-like protein  33.83 
 
 		 142 aa  72.4  0.000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000000000000329746  n/a   
 
 
-
 
NC_011898  Ccel_2239  Holliday junction resolvase-like protein  34.07 
 
 		 142 aa  72.4  0.000000000002  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.0000140275  n/a   
 
 
-
 
NC_013124  Afer_0952  Holliday junction resolvase YqgF  36.43 
 
 		 138 aa  72.8  0.000000000002  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.403393  n/a   
 
 
-
 
NC_009901  Spea_1131  Holliday junction resolvase-like protein  32.59 
 
 		 141 aa  72.4  0.000000000002  Shewanella pealeana ATCC 700345  Bacteria  normal  0.111461  n/a   
 
 
-
 
NC_011145  AnaeK_2633  Holliday junction resolvase-like protein  32.84 
 
 		 137 aa  71.6  0.000000000003  Anaeromyxobacter sp. K  Bacteria  normal  0.854397  n/a   
 
 
-
 
NC_007760  Adeh_1232  Holliday junction resolvase-like protein  33.58 
 
 		 137 aa  71.2  0.000000000004  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_2297  Holliday junction resolvase YqgF  35.04 
 
 		 150 aa  71.2  0.000000000004  Clostridium phytofermentans ISDg  Bacteria  normal  0.470334  n/a   
 
 
-
 
NC_013501  Rmar_0873  Holliday junction resolvase YqgF  36.5 
 
 		 145 aa  71.2  0.000000000005  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_011899  Hore_05800  Holliday junction resolvase YqgF  31.82 
 
 		 140 aa  70.9  0.000000000005  Halothermothrix orenii H 168  Bacteria  normal  0.209228  n/a   
 
 
-
 
NC_008700  Sama_2473  Holliday junction resolvase-like protein  32.58 
 
 		 139 aa  71.2  0.000000000005  Shewanella amazonensis SB2B  Bacteria  normal  0.641283  normal  1 
 
 
-
 
NC_007614  Nmul_A2479  Holliday junction resolvase-like protein  32.82 
 
 		 151 aa  70.9  0.000000000006  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_008347  Mmar10_1708  Holliday junction resolvase YqgF  33.58 
 
 		 151 aa  70.9  0.000000000006  Maricaulis maris MCS10  Bacteria  normal  1  normal  0.180151 
 
 
-
 
NC_009338  Mflv_3762  Holliday junction resolvase YqgF  35.82 
 
 		 175 aa  70.5  0.000000000007  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.454353 
 
 
-
 
NC_004347  SO_3347  Holliday junction resolvase-like protein  32.58 
 
 		 141 aa  70.1  0.000000000009  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_002950  PG2202  Holliday junction resolvase-like protein  36.57 
 
 		 138 aa  69.7  0.00000000001  Porphyromonas gingivalis W83  Bacteria  n/a    normal  1 
 
 
-
 
NC_014150  Bmur_2800  Holliday junction resolvase YqgF  33.85 
 
 		 141 aa  69.7  0.00000000001  Brachyspira murdochii DSM 12563  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_3225  Holliday junction resolvase YqgF  29.32 
 
 		 141 aa  69.7  0.00000000001  Roseiflexus sp. RS-1  Bacteria  normal  0.387387  normal  1 
 
 
-
 
NC_013947  Snas_3877  Holliday junction resolvase YqgF  32.85 
 
 		 151 aa  69.7  0.00000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.843962  normal  1 
 
 
-
 
NC_007510  Bcep18194_A3963  Holliday junction resolvase-like protein  35.82 
 
 		 149 aa  69.7  0.00000000001  Burkholderia sp. 383  Bacteria  normal  1  normal  0.539384 
 
 
-
 
NC_009921  Franean1_1695  Holliday junction resolvase-like protein  32.84 
 
 		 188 aa  69.7  0.00000000001  Frankia sp. EAN1pec  Bacteria  normal  0.0458229  normal  0.165399 
 
 
-
 
NC_009524  PsycPRwf_0143  Holliday junction resolvase YqgF  30.43 
 
 		 177 aa  69.7  0.00000000001  Psychrobacter sp. PRwf-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008312  Tery_4379  Holliday junction resolvase-like protein  30 
 
 		 149 aa  69.7  0.00000000001  Trichodesmium erythraeum IMS101  Bacteria  normal  0.556882  normal  0.251804 
 
 
-
 
NC_013757  Gobs_3157  Holliday junction resolvase YqgF  33.83 
 
 		 222 aa  69.7  0.00000000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.588989  n/a   
 
 
-
 
NC_007484  Noc_0367  Holliday junction resolvase YqgF  30.77 
 
 		 152 aa  68.9  0.00000000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_0153  Holliday junction resolvase-like protein  32.12 
 
 		 141 aa  69.3  0.00000000002  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0185653  n/a   
 
 
-
 
NC_007954  Sden_2673  Holliday junction resolvase-like protein  31.82 
 
 		 141 aa  68.9  0.00000000002  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000201914  n/a   
 
 
-
 
NC_008044  TM1040_0967  Holliday junction resolvase-like protein  32.84 
 
 		 157 aa  69.3  0.00000000002  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011126  HY04AAS1_0205  Holliday junction resolvase YqgF  34.09 
 
 		 123 aa  68.6  0.00000000002  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009484  Acry_0873  Holliday junction resolvase YqgF  29.55 
 
 		 158 aa  68.2  0.00000000003  Acidiphilium cryptum JF-5  Bacteria  normal  0.205729  n/a   
 
 
-
 
NC_008146  Mmcs_2347  Holliday junction resolvase-like protein  32.84 
 
 		 169 aa  68.6  0.00000000003  Mycobacterium sp. MCS  Bacteria  normal  0.502005  n/a   
 
 
-
 
NC_008705  Mkms_2394  Holliday junction resolvase-like protein  32.84 
 
 		 169 aa  68.6  0.00000000003  Mycobacterium sp. KMS  Bacteria  normal  1  normal  0.345644 
 
 
-
 
NC_002977  MCA2335  hypothetical protein  32.33 
 
 		 151 aa  67.8  0.00000000004  Methylococcus capsulatus str. Bath  Bacteria  normal  1  n/a   
 
 
-
 
NC_013205  Aaci_2024  Holliday junction resolvase YqgF  32.06 
 
 		 144 aa  67.8  0.00000000004  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.330713  n/a   
 
 
-
 
NC_008060  Bcen_0383  Holliday junction resolvase-like protein  35.07 
 
 		 149 aa  68.2  0.00000000004  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008261  CPF_2031  Holliday junction resolvase-like protein  32.33 
 
 		 137 aa  68.2  0.00000000004  Clostridium perfringens ATCC 13124  Bacteria  normal  1  n/a   
 
 
-
 
NC_008262  CPR_1748  Holliday junction resolvase-like protein  32.33 
 
 		 137 aa  68.2  0.00000000004  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_1198  Holliday junction resolvase-like protein  32.58 
 
 		 141 aa  68.2  0.00000000004  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000276178  normal  1 
 
 
-
 
NC_008322  Shewmr7_1269  Holliday junction resolvase-like protein  32.58 
 
 		 141 aa  68.2  0.00000000004  Shewanella sp. MR-7  Bacteria  hitchhiker  0.000329275  normal  1 
 
 
-
 
NC_008345  Sfri_2849  Holliday junction resolvase-like protein  32.58 
 
 		 139 aa  68.2  0.00000000004  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_010508  Bcenmc03_0836  Holliday junction resolvase-like protein  35.07 
 
 		 149 aa  68.2  0.00000000004  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.311364  hitchhiker  0.00221177 
 
 
-
 
NC_008542  Bcen2424_0865  Holliday junction resolvase-like protein  35.07 
 
 		 149 aa  68.2  0.00000000004  Burkholderia cenocepacia HI2424  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_1199  Holliday junction resolvase-like protein  32.58 
 
 		 141 aa  68.2  0.00000000004  Shewanella sp. ANA-3  Bacteria  normal  0.0107111  normal  0.529497 
 
 
-
 
NC_010501  PputW619_0468  Holliday junction resolvase-like protein  32.58 
 
 		 141 aa  68.2  0.00000000004  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002947  PP_4996  Holliday junction resolvase-like protein  32.58 
 
 		 141 aa  67.8  0.00000000005  Pseudomonas putida KT2440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_5046  Holliday junction resolvase-like protein  32.58 
 
 		 141 aa  67.8  0.00000000005  Pseudomonas putida GB-1  Bacteria  normal  0.433304  normal  1 
 
 
-
 
NC_009512  Pput_4870  Holliday junction resolvase-like protein  32.58 
 
 		 141 aa  67.8  0.00000000005  Pseudomonas putida F1  Bacteria  normal  1  normal  0.0143218 
 
 
-
 
NC_013162  Coch_1395  Holliday junction resolvase YqgF  34.07 
 
 		 143 aa  67.4  0.00000000005  Capnocytophaga ochracea DSM 7271  Bacteria  normal  1  n/a   
 
 
-
 
NC_009077  Mjls_2388  Holliday junction resolvase-like protein  32.84 
 
 		 169 aa  67.4  0.00000000006  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.0472019 
 
 
-
 
NC_013411  GYMC61_0964  Holliday junction resolvase YqgF  33.33 
 
 		 138 aa  67.4  0.00000000006  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008527  LACR_0138  Holliday junction resolvase-like protein  34.33 
 
 		 143 aa  67.4  0.00000000006  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  1  n/a   
 
 
-
 
NC_011661  Dtur_1024  Holliday junction resolvase YqgF  29.85 
 
 		 141 aa  67.4  0.00000000006  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_3713  Holliday junction resolvase YqgF  29.55 
 
 		 146 aa  67  0.00000000007  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0658941  hitchhiker  0.00476179 
 
 
-
 
NC_011663  Sbal223_1343  Holliday junction resolvase-like protein  30.83 
 
 		 141 aa  66.2  0.0000000001  Shewanella baltica OS223  Bacteria  hitchhiker  0.00897927  hitchhiker  0.00000000052642 
 
 
-
 
NC_013165  Shel_07810  conserved hypothetical protein TIGR00250  30.6 
 
 		 138 aa  66.6  0.0000000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  0.0182311 
 
 
-
 
NC_012793  GWCH70_2488  Holliday junction resolvase YqgF  30.88 
 
 		 138 aa  66.6  0.0000000001  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000680199  n/a   
 
 
-
 
NC_009052  Sbal_3020  Holliday junction resolvase-like protein  30.83 
 
 		 141 aa  66.2  0.0000000001  Shewanella baltica OS155  Bacteria  hitchhiker  0.00101053  n/a   
 
 
-
 
NC_008228  Patl_1154  Holliday junction resolvase YqgF  28.57 
 
 		 143 aa  66.2  0.0000000001  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
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