| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_0540 |
|---|
| Symbol | |
|---|
| ID | 5367357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 607213 |
|---|
| End bp | 607683 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640802876 |
|---|
| Product | Holliday junction resolvase YqgF |
|---|
| Protein accession | YP_001339411 |
|---|
| Protein GI | 152994576 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
|---|
| TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGGT CAATCTCTAC AGGAACATCG TTAGATGATA ACCAGAAGCC CAATACTGTT
CGCTCAGTAT TGGGCTTTGA CTTTGGTACC ACACGTATTG GCGTTGCTAT TGGTCAGAGC
ATTACTGGCA CCGCTCAGCC GCTTGACCCA TTAAAAGCCA AAGAAGGCAT TCCTAATTGG
GATGAAATCA CGCGTATCGT TGAAGAATGG AAGCCAGATG CCTTTGTAGT TGGCTTGCCA
CTTGATATGG ATGGTTCAGA AAATGAGATG TGTCAACGTG CACGTAAATT TGCCAAACGA
TTGCATGGAC GTTTTAACCT TCCTTACCAT ATGATGGACG AACGATTGTC TTCTTATGAA
GCCAAGGGGC AGGTTATTGC TCGTGGAGGC AATCGTAACT TTAAAGAAAA TTCGGTAGAT
GGGCTGGCCG CTCAAATGAT TTTAGAGACT TGGTTTGCTG AGTCTTACTA G
|
|---|
| Protein sequence | MTGSISTGTS LDDNQKPNTV RSVLGFDFGT TRIGVAIGQS ITGTAQPLDP LKAKEGIPNW
DEITRIVEEW KPDAFVVGLP LDMDGSENEM CQRARKFAKR LHGRFNLPYH MMDERLSSYE
AKGQVIARGG NRNFKENSVD GLAAQMILET WFAESY
|
|---|
| |