Gene Tcr_1828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1828 
Symbol 
ID3761041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp2004312 
End bp2004716 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content47% 
IMG OID637786572 
ProductHolliday junction resolvase YqgF 
Protein accessionYP_392094 
Protein GI78486169 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAAC CGATTGAGGG CGTCGTGATC GGTTTTGATT TCGGTTTAAA ACGTATTGGG 
GTTGCGATTG GTCAGACTAT TACGCGCACC GCCACCCCGG AAGCGATTGT GGCCAGCAAA 
GATGGCAAAC CCGATTGGGA ACACATTTCT CGTTTGTTTG AAGAGTGGAA ACCCAGTGCG 
ATTGTCGTTG GGTTGCCCAT GCGCTTAAAC GGAGAAGAAC AGGCTTTAAC ACAACCTGCC 
CGGAAATTTG GGCAACGCTT GAGTGGCCGT TATCAAAGAC CGGTTTATTA TATCGAAGAG 
CAACTGAGCT CTATTGAGGC GGAACAACGT AAAACAAAAA CCGATCAACC GATGGATGAT 
CACGCTGCAC AAATTATTTT AGAAAATTGG TTAGACGCTC TCTAA
 
Protein sequence
MTKPIEGVVI GFDFGLKRIG VAIGQTITRT ATPEAIVASK DGKPDWEHIS RLFEEWKPSA 
IVVGLPMRLN GEEQALTQPA RKFGQRLSGR YQRPVYYIEE QLSSIEAEQR KTKTDQPMDD 
HAAQIILENW LDAL