More than 300 homologs were found in PanDaTox collection
for query gene Lferr_2668 on replicon NC_011206
Organism: Acidithiobacillus ferrooxidans ATCC 53993



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011761  AFE_3061  hypothetical protein  100 
 
 		 143 aa  288  2e-77  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_011206  Lferr_2668  Holliday junction resolvase YqgF  100 
 
 		 143 aa  288  2e-77  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.933138  normal  1 
 
 
-
 
NC_009654  Mmwyl1_0540  Holliday junction resolvase YqgF  42.96 
 
 		 156 aa  101  4e-21  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010718  Nther_1778  Holliday junction resolvase YqgF  35.66 
 
 		 141 aa  99.4  1e-20  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  0.140554 
 
 
-
 
NC_008009  Acid345_0556  Holliday junction resolvase YqgF  38.93 
 
 		 153 aa  97.1  7e-20  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.901255  normal  0.0480752 
 
 
-
 
NC_007947  Mfla_2100  Holliday junction resolvase-like protein  40.56 
 
 		 146 aa  96.7  9e-20  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007510  Bcep18194_A3963  Holliday junction resolvase-like protein  37.59 
 
 		 149 aa  95.1  3e-19  Burkholderia sp. 383  Bacteria  normal  1  normal  0.539384 
 
 
-
 
NC_010551  BamMC406_0755  Holliday junction resolvase-like protein  37.59 
 
 		 149 aa  94.7  4e-19  Burkholderia ambifaria MC40-6  Bacteria  normal  0.302865  normal  0.26532 
 
 
-
 
NC_007484  Noc_0367  Holliday junction resolvase YqgF  39.26 
 
 		 152 aa  94.7  4e-19  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_009727  CBUD_2194  Holliday junction resolvase-like protein  39.85 
 
 		 141 aa  94.4  4e-19  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.401443  n/a   
 
 
-
 
NC_008390  Bamb_0738  Holliday junction resolvase-like protein  37.59 
 
 		 149 aa  94.7  4e-19  Burkholderia ambifaria AMMD  Bacteria  normal  0.89107  n/a   
 
 
-
 
NC_006368  lpp0637  Holliday junction resolvase-like protein  37.5 
 
 		 139 aa  94.4  5e-19  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_010117  COXBURSA331_A2220  Holliday junction resolvase-like protein  39.85 
 
 		 141 aa  94  6e-19  Coxiella burnetii RSA 331  Bacteria  hitchhiker  0.0000000031992  n/a   
 
 
-
 
NC_006369  lpl0621  Holliday junction resolvase-like protein  36.72 
 
 		 139 aa  93.6  7e-19  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_008346  Swol_0470  Holliday junction resolvase YqgF  38.06 
 
 		 141 aa  94  7e-19  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.00000000599692  n/a   
 
 
-
 
NC_010508  Bcenmc03_0836  Holliday junction resolvase-like protein  36.84 
 
 		 149 aa  93.6  9e-19  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.311364  hitchhiker  0.00221177 
 
 
-
 
NC_008060  Bcen_0383  Holliday junction resolvase-like protein  36.84 
 
 		 149 aa  93.6  9e-19  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008542  Bcen2424_0865  Holliday junction resolvase-like protein  36.84 
 
 		 149 aa  93.6  9e-19  Burkholderia cenocepacia HI2424  Bacteria  normal  1  n/a   
 
 
-
 
NC_010084  Bmul_2523  Holliday junction resolvase-like protein  36.09 
 
 		 149 aa  92  3e-18  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  0.159244 
 
 
-
 
NC_007298  Daro_3892  Holliday junction resolvase-like protein  41.98 
 
 		 146 aa  91.3  4e-18  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008340  Mlg_0348  Holliday junction resolvase YqgF  42.36 
 
 		 144 aa  90.9  5e-18  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.180305  normal  1 
 
 
-
 
NC_007413  Ava_3804  Holliday junction resolvase-like protein  37.6 
 
 		 151 aa  90.1  9e-18  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0796335  normal  1 
 
 
-
 
NC_011884  Cyan7425_2514  Holliday junction resolvase-like protein  39.2 
 
 		 150 aa  90.1  9e-18  Cyanothece sp. PCC 7425  Bacteria  normal  0.36708  normal  1 
 
 
-
 
NC_008312  Tery_4379  Holliday junction resolvase-like protein  34.59 
 
 		 149 aa  90.1  9e-18  Trichodesmium erythraeum IMS101  Bacteria  normal  0.556882  normal  0.251804 
 
 
-
 
NC_007644  Moth_1640  Holliday junction resolvase YqgF  37.21 
 
 		 140 aa  89.7  1e-17  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.278901  normal  0.163549 
 
 
-
 
NC_007963  Csal_0059  Holliday junction resolvase-like protein  41.86 
 
 		 148 aa  89.4  1e-17  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_008789  Hhal_0939  Holliday junction resolvase YqgF  47.41 
 
 		 142 aa  89.7  1e-17  Halorhodospira halophila SL1  Bacteria  normal  0.193573  n/a   
 
 
-
 
NC_007614  Nmul_A2479  Holliday junction resolvase-like protein  39.85 
 
 		 151 aa  89.4  2e-17  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_03294  Holliday junction resolvase-like protein  36.43 
 
 		 143 aa  89.4  2e-17  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.659098  n/a   
 
 
-
 
NC_009436  Ent638_3353  Holliday junction resolvase-like protein  37.5 
 
 		 138 aa  88.2  3e-17  Enterobacter sp. 638  Bacteria  normal  0.2584  decreased coverage  0.0020385 
 
 
-
 
CP001637  EcDH1_0746  Holliday junction resolvase YqgF  36.76 
 
 		 138 aa  87.8  4e-17  Escherichia coli DH1  Bacteria  normal  0.61838  n/a   
 
 
-
 
NC_009800  EcHS_A3107  Holliday junction resolvase-like protein  36.76 
 
 		 138 aa  87.8  4e-17  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_011080  SNSL254_A3344  Holliday junction resolvase-like protein  36.76 
 
 		 138 aa  87.8  4e-17  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.130119  normal  0.247443 
 
 
-
 
NC_010468  EcolC_0765  Holliday junction resolvase-like protein  36.76 
 
 		 138 aa  87.8  4e-17  Escherichia coli ATCC 8739  Bacteria  normal  0.809741  hitchhiker  0.0000191582 
 
 
-
 
NC_011353  ECH74115_4252  Holliday junction resolvase-like protein  36.76 
 
 		 138 aa  87.8  4e-17  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.367892  normal  0.370097 
 
 
-
 
NC_008530  LGAS_0423  Holliday junction resolvase-like protein  33.09 
 
 		 143 aa  87.8  4e-17  Lactobacillus gasseri ATCC 33323  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010498  EcSMS35_3091  Holliday junction resolvase-like protein  36.76 
 
 		 138 aa  87.4  5e-17  Escherichia coli SMS-3-5  Bacteria  normal  0.372008  decreased coverage  0.00000514809 
 
 
-
 
NC_009801  EcE24377A_3292  Holliday junction resolvase-like protein  36.76 
 
 		 138 aa  87.4  5e-17  Escherichia coli E24377A  Bacteria  normal  0.684819  n/a   
 
 
-
 
NC_010658  SbBS512_E3381  Holliday junction resolvase-like protein  36.76 
 
 		 138 aa  87.4  5e-17  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
NC_008686  Pden_0510  Holliday junction resolvase-like protein  41.79 
 
 		 158 aa  87.8  5e-17  Paracoccus denitrificans PD1222  Bacteria  normal  0.556579  normal  1 
 
 
-
 
NC_011901  Tgr7_2911  Holliday junction resolvase YqgF  38.98 
 
 		 163 aa  86.7  9e-17  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.816073  n/a   
 
 
-
 
CP001509  ECD_02779  Holliday junction resolvase-like protein  37.12 
 
 		 138 aa  86.3  1e-16  Escherichia coli BL21(DE3)  Bacteria  normal  0.358182  n/a   
 
 
-
 
NC_012892  B21_02742  hypothetical protein  37.12 
 
 		 138 aa  86.3  1e-16  Escherichia coli BL21  Bacteria  normal  0.395069  n/a   
 
 
-
 
NC_010622  Bphy_2326  Holliday junction resolvase-like protein  34.59 
 
 		 151 aa  86.3  1e-16  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.0635951 
 
 
-
 
NC_011663  Sbal223_1343  Holliday junction resolvase-like protein  38.83 
 
 		 141 aa  85.5  2e-16  Shewanella baltica OS223  Bacteria  hitchhiker  0.00897927  hitchhiker  0.00000000052642 
 
 
-
 
NC_011083  SeHA_C3336  Holliday junction resolvase-like protein  36.03 
 
 		 138 aa  85.5  2e-16  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  0.392173 
 
 
-
 
NC_010501  PputW619_0468  Holliday junction resolvase-like protein  42.42 
 
 		 141 aa  85.5  2e-16  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011094  SeSA_A3271  Holliday junction resolvase-like protein  36.03 
 
 		 138 aa  85.5  2e-16  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  0.0744312 
 
 
-
 
NC_009052  Sbal_3020  Holliday junction resolvase-like protein  38.83 
 
 		 141 aa  85.5  2e-16  Shewanella baltica OS155  Bacteria  hitchhiker  0.00101053  n/a   
 
 
-
 
NC_009656  PSPA7_0504  Holliday junction resolvase-like protein  44.44 
 
 		 144 aa  85.5  2e-16  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_3035  Holliday junction resolvase-like protein  38.83 
 
 		 141 aa  85.5  2e-16  Shewanella baltica OS185  Bacteria  hitchhiker  0.00000814628  n/a   
 
 
-
 
NC_011149  SeAg_B3260  Holliday junction resolvase-like protein  36.03 
 
 		 138 aa  85.5  2e-16  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.254908  n/a   
 
 
-
 
NC_008463  PA14_05280  Holliday junction resolvase-like protein  44.44 
 
 		 144 aa  85.5  2e-16  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009997  Sbal195_3178  Holliday junction resolvase-like protein  38.83 
 
 		 141 aa  85.5  2e-16  Shewanella baltica OS195  Bacteria  hitchhiker  0.000555794  normal  0.0157194 
 
 
-
 
NC_011899  Hore_05800  Holliday junction resolvase YqgF  32.82 
 
 		 140 aa  84.7  3e-16  Halothermothrix orenii H 168  Bacteria  normal  0.209228  n/a   
 
 
-
 
NC_013421  Pecwa_3911  Holliday junction resolvase-like protein  38.35 
 
 		 139 aa  85.1  3e-16  Pectobacterium wasabiae WPP163  Bacteria  normal  0.0877728  n/a   
 
 
-
 
NC_010717  PXO_02001  Holliday junction resolvase-like protein  41.03 
 
 		 155 aa  84.7  4e-16  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_007951  Bxe_A3810  Holliday junction resolvase-like protein  33.83 
 
 		 146 aa  84.3  4e-16  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_5046  Holliday junction resolvase-like protein  42.42 
 
 		 141 aa  84.7  4e-16  Pseudomonas putida GB-1  Bacteria  normal  0.433304  normal  1 
 
 
-
 
NC_008527  LACR_0138  Holliday junction resolvase-like protein  34.56 
 
 		 143 aa  84.7  4e-16  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  1  n/a   
 
 
-
 
NC_009512  Pput_4870  Holliday junction resolvase-like protein  42.42 
 
 		 141 aa  84.7  4e-16  Pseudomonas putida F1  Bacteria  normal  1  normal  0.0143218 
 
 
-
 
NC_002947  PP_4996  Holliday junction resolvase-like protein  42.42 
 
 		 141 aa  84.3  5e-16  Pseudomonas putida KT2440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009438  Sputcn32_2682  Holliday junction resolvase-like protein  39.81 
 
 		 141 aa  84.3  5e-16  Shewanella putrefaciens CN-32  Bacteria  normal  0.0331396  n/a   
 
 
-
 
NC_008044  TM1040_0967  Holliday junction resolvase-like protein  39.68 
 
 		 157 aa  84.3  5e-16  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011205  SeD_A3440  Holliday junction resolvase-like protein  36.03 
 
 		 138 aa  84.3  5e-16  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  hitchhiker  0.00956364 
 
 
-
 
NC_007777  Francci3_3213  Holliday junction resolvase-like protein  38.81 
 
 		 202 aa  84  6e-16  Frankia sp. CcI3  Bacteria  normal  0.0825611  normal  1 
 
 
-
 
NC_007912  Sde_3638  Holliday junction resolvase-like protein  40.2 
 
 		 142 aa  84  6e-16  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014248  Aazo_4148  Holliday junction resolvase YqgF  35.56 
 
 		 158 aa  84  6e-16  'Nostoc azollae' 0708  Bacteria  normal  0.927535  n/a   
 
 
-
 
NC_008321  Shewmr4_1198  Holliday junction resolvase-like protein  40 
 
 		 141 aa  84  6e-16  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000276178  normal  1 
 
 
-
 
NC_008322  Shewmr7_1269  Holliday junction resolvase-like protein  40 
 
 		 141 aa  84  6e-16  Shewanella sp. MR-7  Bacteria  hitchhiker  0.000329275  normal  1 
 
 
-
 
NC_008531  LEUM_0558  Holliday junction resolvase-like protein  34.31 
 
 		 143 aa  84  6e-16  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  1  n/a   
 
 
-
 
NC_009253  Dred_0775  Holliday junction resolvase YqgF  31.34 
 
 		 137 aa  84.3  6e-16  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000000463594  n/a   
 
 
-
 
NC_008577  Shewana3_1199  Holliday junction resolvase-like protein  40 
 
 		 141 aa  84  6e-16  Shewanella sp. ANA-3  Bacteria  normal  0.0107111  normal  0.529497 
 
 
-
 
NC_012917  PC1_3713  Holliday junction resolvase-like protein  37.5 
 
 		 139 aa  84  6e-16  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0641904  n/a   
 
 
-
 
NC_004347  SO_3347  Holliday junction resolvase-like protein  35 
 
 		 141 aa  83.6  9e-16  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013223  Dret_1130  Holliday junction resolvase YqgF  34.85 
 
 		 142 aa  83.6  9e-16  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009428  Rsph17025_1879  Holliday junction resolvase-like protein  40 
 
 		 160 aa  83.2  0.000000000000001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.620593  normal  1 
 
 
-
 
NC_007492  Pfl01_5312  Holliday junction resolvase-like protein  41.41 
 
 		 145 aa  83.2  0.000000000000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0190801  normal  0.217295 
 
 
-
 
NC_010159  YpAngola_A3340  Holliday junction resolvase-like protein  35.29 
 
 		 140 aa  82.8  0.000000000000001  Yersinia pestis Angola  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012560  Avin_03140  Holliday junction resolvase-like protein  43.27 
 
 		 142 aa  82.8  0.000000000000001  Azotobacter vinelandii DJ  Bacteria  normal  0.567501  n/a   
 
 
-
 
NC_010465  YPK_0836  Holliday junction resolvase-like protein  35.29 
 
 		 140 aa  82.8  0.000000000000001  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.0695104  n/a   
 
 
-
 
NC_009708  YpsIP31758_0834  Holliday junction resolvase-like protein  35.29 
 
 		 140 aa  82.8  0.000000000000001  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_004578  PSPTO_5038  hypothetical protein  40.4 
 
 		 146 aa  82  0.000000000000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_012880  Dd703_0543  Holliday junction resolvase-like protein  40.57 
 
 		 139 aa  82.4  0.000000000000002  Dickeya dadantii Ech703  Bacteria  normal  0.0491649  n/a   
 
 
-
 
NC_007005  Psyr_0484  Holliday junction resolvase-like protein  40.4 
 
 		 146 aa  82  0.000000000000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010320  Teth514_1491  Holliday junction resolvase-like protein  31.58 
 
 		 139 aa  82  0.000000000000002  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.0000000000748947  n/a   
 
 
-
 
NC_007604  Synpcc7942_2398  Holliday junction resolvase-like protein  38.4 
 
 		 149 aa  82.8  0.000000000000002  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0366153  hitchhiker  0.00151496 
 
 
-
 
NC_009832  Spro_4028  Holliday junction resolvase-like protein  36.84 
 
 		 140 aa  82.4  0.000000000000002  Serratia proteamaculans 568  Bacteria  normal  0.290268  hitchhiker  0.00115108 
 
 
-
 
NC_009074  BURPS668_3111  Holliday junction resolvase-like protein  40 
 
 		 146 aa  82.8  0.000000000000002  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_008345  Sfri_2849  Holliday junction resolvase-like protein  39.39 
 
 		 139 aa  82.4  0.000000000000002  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_012912  Dd1591_0500  Holliday junction resolvase-like protein  40.57 
 
 		 143 aa  82.8  0.000000000000002  Dickeya zeae Ech1591  Bacteria  normal  0.23587  n/a   
 
 
-
 
NC_010681  Bphyt_0869  Holliday junction resolvase-like protein  34.59 
 
 		 146 aa  81.6  0.000000000000003  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  0.0747835 
 
 
-
 
NC_006348  BMA1996  Holliday junction resolvase-like protein  40 
 
 		 146 aa  82  0.000000000000003  Burkholderia mallei ATCC 23344  Bacteria  normal  0.391575  n/a   
 
 
-
 
NC_007434  BURPS1710b_3169  Holliday junction resolvase-like protein  40 
 
 		 146 aa  82  0.000000000000003  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_008836  BMA10229_A2747  Holliday junction resolvase-like protein  40 
 
 		 146 aa  82  0.000000000000003  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009076  BURPS1106A_3147  Holliday junction resolvase-like protein  40 
 
 		 146 aa  82  0.000000000000003  Burkholderia pseudomallei 1106a  Bacteria  normal  0.822464  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0917  Holliday junction resolvase-like protein  40 
 
 		 146 aa  82  0.000000000000003  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009080  BMA10247_1858  Holliday junction resolvase-like protein  40 
 
 		 146 aa  82  0.000000000000003  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_007520  Tcr_1828  Holliday junction resolvase YqgF  32.85 
 
 		 134 aa  81.3  0.000000000000004  Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_008347  Mmar10_1708  Holliday junction resolvase YqgF  38.46 
 
 		 151 aa  81.6  0.000000000000004  Maricaulis maris MCS10  Bacteria  normal  1  normal  0.180151 
 
 
-
 
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