Gene Sfri_2849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2849 
Symbol 
ID4279754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp3434949 
End bp3435368 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content42% 
IMG OID638135667 
ProductHolliday junction resolvase-like protein 
Protein accessionYP_751527 
Protein GI114564013 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACCAC AAACCGTTTT AGGGTTCGAC TACGGCACCA AAAGTATTGG TGTCGCTATA 
GGTCAAGCCA TTACAGCAAG TGCCACGCCT TTATTATCAA TTAAAGCGGT TGATGGGATC 
CCTAATTGGG ATGATATCGA TAAATTATTA AAAGAATGGC AACCAGATCT CGTTGTTGTC 
GGCTTACCGT TAAACATGGA CGGCACCGAG CAAGAGATGA CTCAACGAGC TCGAAAATTC 
GCTAATCGAA TTAATGGTCG TTTTGGCGTT AAAATTGCCA CCCAAGACGA ACGTTTGACC 
ACTGCAGATG CTAAAGCCCG TTTATTCGAA TTAGGTGGTT TTAAAGCGTT AACCAAAGGT 
CAAGTTGATG CTGTGTCAGC TGTGTTAATT ATTGAAAGCT ATTTCGAAAA CCAATTCTAA
 
Protein sequence
MQPQTVLGFD YGTKSIGVAI GQAITASATP LLSIKAVDGI PNWDDIDKLL KEWQPDLVVV 
GLPLNMDGTE QEMTQRARKF ANRINGRFGV KIATQDERLT TADAKARLFE LGGFKALTKG 
QVDAVSAVLI IESYFENQF