Gene Sputcn32_2682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2682 
Symbol 
ID5079993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp3110494 
End bp3110919 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content43% 
IMG OID640499864 
ProductHolliday junction resolvase-like protein 
Protein accessionYP_001184200 
Protein GI146293776 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0331396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCTA AAACTGTTTT AGGCTTTGAT TTTGGTACAA AAAGTATCGG TGTTGCCATT 
GGACAAGAAA TCACTGCCAG TGCCACACCA CTCCTGTCGC TCAAGGCTGT AGACGGCATC 
CCCAATTGGG ATCAAATAGG GGATCTCATT AAAGAGTGGC AGCCAGATCT CGTTGTTGTT 
GGCTTACCCC TTAATATGGA TGGTACTGAG CAGGACATGA CCCACAGAGC CCGTAAGTTT 
GCCAATAGGA TCAATGCTAA ATTTGGGGTA AAAATCGTGA CTCAAGATGA AAGATTAACG 
ACAACAGATG CCAAAGCGAG ATTGTTTGAG TTAGGTGGTT TTAAAGCCTT AACGAAAGGT 
CAAGTCGATG CGGTTTCTGC AGTGCTTATC ATAGAAAGCT ATTTCGAAAA CCAATTTGGT 
CGCTAG
 
Protein sequence
MNSKTVLGFD FGTKSIGVAI GQEITASATP LLSLKAVDGI PNWDQIGDLI KEWQPDLVVV 
GLPLNMDGTE QDMTHRARKF ANRINAKFGV KIVTQDERLT TTDAKARLFE LGGFKALTKG 
QVDAVSAVLI IESYFENQFG R