Gene YPK_0836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0836 
Symbol 
ID6091333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand- 
Start bp959130 
End bp959552 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content53% 
IMG OID641595898 
ProductHolliday junction resolvase-like protein 
Protein accessionYP_001719590 
Protein GI170023085 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0695104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAATC GCACAATTAT TGCTTTTGAT TTTGGTACCA AAAGTATCGG TGTCGCCATC 
GGTCAGGAAG TCACCGGAAC GGCCAGAGCG CTAACCGCGT TTAAAGCACA AGATGGCACC 
CCGGATTGGC AGCAAGTTGA AAAGCTGTTG AAAGAGTGGC AGCCCAATTT AGTGGTAGTC 
GGCCTGCCGC TCAATATGGA TGGCACTGAA CAACCACTAA CCGCCAGAGC TCGTCGGTTT 
GCCAACCGTC TGCATGGGCG CTTTGGTGTA CAGGTCGCCT TACAGGATGA ACGCCTCAGT 
ACGGTAGAAG CCCGCGCCAA TCTGTTTGAC CGCGGTGGCT ATCGCGCTCT GGATAAAGGC 
AGTGTCGATG CAGCCTCTGC GGTGATCATT TTGGAAAGCT GGTTTGATGA GCAAGCAGGT 
TGA
 
Protein sequence
MANRTIIAFD FGTKSIGVAI GQEVTGTARA LTAFKAQDGT PDWQQVEKLL KEWQPNLVVV 
GLPLNMDGTE QPLTARARRF ANRLHGRFGV QVALQDERLS TVEARANLFD RGGYRALDKG 
SVDAASAVII LESWFDEQAG