Gene PP_4996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4996 
Symbol 
ID1043208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5693261 
End bp5693686 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content65% 
IMG OID637148396 
ProductHolliday junction resolvase-like protein 
Protein accessionNP_747098 
Protein GI26991673 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATC TACGCCTGCT GCTGGGCTTC GACTATGGCA GCAAACAGAT CGGCGTGGCC 
GTCGGCCAGG TGATTACCGG CCAGGCCCGC GAACTGTGCA CCCTGAAGGC GCAGAACGGC
GTACCGGACT GGGCCCAGGT GGAAAAGCTG ATTGCCGAAT GGAAGCCAGA TGCCATTGTC
GTCGGCCTGC CGCTGAACAT GGACGGCACA CCCAGCGAAA TGAGCGCCCG CGCCGAAAAG
TTCGCCCGCC GCCTGAACGG CCGCTTCAAC CTGCCCGTGC ACACGCACGA CGAGCGCCTG
ACCACCTTCG AGGCCAAAGG CGAGCGCATG GCCCGTGGCG GCCAGCGTGG CAGCTACCGC
GACAACCCGG TCGATGCCAT TGCCGCCGCC TTGTTGCTGC AAGGCTGGCT GGAGGCCAAT
ACCTGA
 
Protein sequence
MADLRLLLGF DYGSKQIGVA VGQVITGQAR ELCTLKAQNG VPDWAQVEKL IAEWKPDAIV 
VGLPLNMDGT PSEMSARAEK FARRLNGRFN LPVHTHDERL TTFEAKGERM ARGGQRGSYR
DNPVDAIAAA LLLQGWLEAN T