| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1343 |
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| Symbol | |
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| ID | 7088768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 1575215 |
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| End bp | 1575640 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643460247 |
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| Product | Holliday junction resolvase-like protein |
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| Protein accession | YP_002357274 |
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| Protein GI | 217972523 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
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| TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00897927 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000000052642 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAATTCGA AAACCGTATT AGGCTTTGAT TTTGGCACTA AAAGTATTGG TGTGGCTATA
GGCCAAGAAA TCACCGCTAG CGCCACGCCA TTATTGTCAA TTAAAGCCGT CGATGGGATC
CCCAACTGGG ATCAGATAGG CGATTTAATC AAAGAGTGGC AACCAGACCT AGTGGTCGTC
GGCCTGCCCT TAAACATGGA TGGCACTGAG CAAGATATGA CCCACAGGGC GCGTAAATTT
GCGAACCGTA TCAATGCTAA GTTCAAAGTC AAAATAGCCA CACAAGATGA GCGATTAACC
ACTACCGATG CTAAGGCAAG ATTATTCGAG TTAGGCGGAT TCAAGGCGCT CACCAAAGGC
CAAGTCGATG CTGTGTCTGC CGTACTGATT ATTGAAAGCT ACTTCGAAAA TAACTTCAGC
AAGTAA
|
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| Protein sequence | MNSKTVLGFD FGTKSIGVAI GQEITASATP LLSIKAVDGI PNWDQIGDLI KEWQPDLVVV
GLPLNMDGTE QDMTHRARKF ANRINAKFKV KIATQDERLT TTDAKARLFE LGGFKALTKG
QVDAVSAVLI IESYFENNFS K
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