Gene MADE_03294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03294 
Symbol 
ID6777137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp3557488 
End bp3557919 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content49% 
IMG OID642756742 
ProductHolliday junction resolvase-like protein 
Protein accessionYP_002127580 
Protein GI196158091 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.659098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGAGT TAGGCAGTCG TACTGTATTA GCGTTCGACT TTGGCACTAA GAGTATTGGT 
GTGGCAGTTG GCCAAGAAAT TACCGGTACA GCCTCACCTC TTCCCGCGTT AAAAGCTCGC 
GACGGTATTC CAGACTGGAA TGTAATTGAA AAGCTTTACG AAGAGTGGCA GCCTCACGTG 
GTAGTGGTAG GCTTGCCCCT TAATATGGAC GGCACCGAAC AGGAAATGAC GCAGCGTGCG 
CGAAAGTTCG CTAACCGCCT TCACGGGCGT TTTCGCGTTG CAGTAGAAAC GTGTGATGAG 
CGCCTCACCA CAACTGACGC CAAATCTATG CTATTTGAAT TAGGTGGGTA CAAAAAACTG 
ACAAAAGACA AAGTCGATAG CGTGTCGGCC TGCGTTATTT TCGCCAGTTG GAATGAAAGC 
CAATACGAGT AG
 
Protein sequence
MPELGSRTVL AFDFGTKSIG VAVGQEITGT ASPLPALKAR DGIPDWNVIE KLYEEWQPHV 
VVVGLPLNMD GTEQEMTQRA RKFANRLHGR FRVAVETCDE RLTTTDAKSM LFELGGYKKL 
TKDKVDSVSA CVIFASWNES QYE