Gene EcHS_A3107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3107 
Symbol 
ID5593835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand+ 
Start bp3121139 
End bp3121555 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content53% 
IMG OID640922226 
ProductHolliday junction resolvase-like protein 
Protein accessionYP_001459726 
Protein GI157162408 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGGAA CCTTACTCGC CTTCGACTTC GGCACCAAAA GCATTGGCGT AGCGGTCGGC 
CAACGCATTA CCGGCACCGC TCGCCCTTTG CCTGCAATTA AAGCACAGGA CGGTACGCCG 
GACTGGAACA TTATCGAGCG TTTACTGAAA GAGTGGCAGC CGGACGAAAT CATCGTCGGT 
TTGCCGCTGA ATATGGACGG CACCGAGCAA CCATTGACTG CCAGAGCGCG TAAATTCGCC 
AACCGTATTC ATGGTCGTTT CGGTGTTGAA GTAAAGCTCC ATGACGAGCG TCTTAGCACC 
GTGGAAGCCC GTTCCGGTCT GTTTGAACAG GGCGGCTATC GGGCGCTCAA CAAAGGCAAA 
GTTGACTCTG CCTCTGCGGT TATTATTCTC GAAAGCTATT TCGAGCAGGG ATATTAA
 
Protein sequence
MSGTLLAFDF GTKSIGVAVG QRITGTARPL PAIKAQDGTP DWNIIERLLK EWQPDEIIVG 
LPLNMDGTEQ PLTARARKFA NRIHGRFGVE VKLHDERLST VEARSGLFEQ GGYRALNKGK 
VDSASAVIIL ESYFEQGY