Gene SNSL254_A3344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3344 
Symbol 
ID6482351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3247997 
End bp3248413 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content56% 
IMG OID642738635 
ProductHolliday junction resolvase-like protein 
Protein accessionYP_002042356 
Protein GI194442861 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.130119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value0.247443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCA CCTTACTGGC CTTTGACTTC GGCACAAAAA GCATCGGCGT TGCAATAGGA 
CAACGCATTA CCGGCACCGC CCGTCCGCTT CCGGCAATCA AAGCACAGGA CGGCACGCCC
GACTGGACGC TCATTGAACG TTTGCTGAAA GAGTGGCAGC CGGACGAAAT TATTGTCGGG
CTACCGCTCA ATATGGATGG CACTGAACAG CCGCTGACGG CGCGCGCACG TAAATTCGCC
AACCGTATTC ATGGGCGTTT CGGGGTAACT GTCACGCTGC ACGATGAACG ACTCAGCACC
GTTGAAGCAC GCTCCGGTCT GTTTGAACGA GGTGGGTATC GCGCGCTGAA CAAAGGCAAA
GTGGACTCGG CCTCCGCCGT GATTATCCTC GAAAGCTATT TTGAACAGGG GTATTAA
 
Protein sequence
MSGTLLAFDF GTKSIGVAIG QRITGTARPL PAIKAQDGTP DWTLIERLLK EWQPDEIIVG 
LPLNMDGTEQ PLTARARKFA NRIHGRFGVT VTLHDERLST VEARSGLFER GGYRALNKGK
VDSASAVIIL ESYFEQGY