Gene SbBS512_E3381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3381 
Symbol 
ID6268433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp3146731 
End bp3147147 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content53% 
IMG OID641727272 
ProductHolliday junction resolvase-like protein 
Protein accessionYP_001881722 
Protein GI187731869 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGGAA CCTTACTCGC CTTCGACTTC GGCACCAAAA GCATTGGCGT AGCGGTCGGC 
CAACGCATTA CCGGCACTGC TCGCCCTTTG CCTGCAATTA AAGCACAGGA CGGTACGCCG 
GACTGGAACC TCATCGAACG TTTACTGAAA GAGTGGCAGC CGGACGAAAT CATCGTCGGT 
TTGCCGCTGA ATATGGACGG CACCGAGCAA CCATTGACTG CCAGAGCGCG TAAATTTGCC 
AACCGTATTC ATGGTCGTTT CGGTGTTGAA GTAAAGCTCC ATGACGAACG TCTTAGCACC 
GTGGAAGCCC GTTCCGGTCT GTTTGAACAG GGCGGCTATC GGGCGCTCAA CAAAGGCAAA 
GTCGACTCAG CCTCTGCGGT TATTATTCTC GAAAGCTATT TCGAGCAGGG ATATTAA
 
Protein sequence
MSGTLLAFDF GTKSIGVAVG QRITGTARPL PAIKAQDGTP DWNLIERLLK EWQPDEIIVG 
LPLNMDGTEQ PLTARARKFA NRIHGRFGVE VKLHDERLST VEARSGLFEQ GGYRALNKGK 
VDSASAVIIL ESYFEQGY