Gene PSPTO_5038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5038 
Symbol 
ID1186723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp5739664 
End bp5740104 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content64% 
IMG OID637396359 
Producthypothetical protein 
Protein accessionNP_794771 
Protein GI28872152 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGCTT TACGCTTGCT GCTGGGGATC GACTACGGCA CCAAACAGAT CGGCGTCGCG 
GTCGGCCAGG CGATTACCGG CCAGGCCCGC GAACTCTGTA CGCTCAAGGC GCAGAACGGC 
GTCCCGGACT GGGACAAGGT CCAGGCGCTG ATCAACGAAT GGAAACCTGA CGCCATCGTG 
GTCGGCCTGC CGCTGAACAT GGACGGCACG CCCAGCGAGA TGAGTGCCCG CGCCGAGAAG 
TTTTCGCGCA AACTCAACGG CCGCTTCGGC GTCACGGTCT ACACCCACGA CGAACGCCTG 
ACGACCTTCG AGGCCAAGGG CGAGCGCATG GCTCGCGGCG GCCAGAAAGG CAGCTATCGC 
GACAACCCGG TGGACGCCAT TGCCGCTGCG CTGCTGCTGC AAGGCTGGCT CGACGAGCAC 
CCCGAATTGC TGAATGTGTG A
 
Protein sequence
MAALRLLLGI DYGTKQIGVA VGQAITGQAR ELCTLKAQNG VPDWDKVQAL INEWKPDAIV 
VGLPLNMDGT PSEMSARAEK FSRKLNGRFG VTVYTHDERL TTFEAKGERM ARGGQKGSYR 
DNPVDAIAAA LLLQGWLDEH PELLNV