Gene Bamb_0738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0738 
Symbol 
ID4311094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand+ 
Start bp818135 
End bp818584 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content68% 
IMG OID638148533 
ProductHolliday junction resolvase-like protein 
Protein accessionYP_772631 
Protein GI115350792 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.89107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGGCG CGAGTGCGCG CGATGCGACG CTGCTGGGGT TCGACTACGG CGAGAAGCGG 
ATCGGAGTCG CAATCGGCAA TGCGCTGACG CGCTCGGCCC GCGCGCTCGT CGTGATTCCC 
AACCTGAACC GCGAACACCG CTTCAAGGCG GTCGGCGACC TGCTGGCCGA ATGGCGGCCG 
GACGCGCTCG TCGTCGGCCT GCCGATGCAT CCGGACGGCA CGCCGCACGA GATGACGCAG 
CAGGCGAAGC GCTTCGGCAA CCAGCTGAAC GGCCGCTTCG GGCTGCCTGT CACGTGGGTC 
GACGAACGCT ATTCGTCGGT CGAGGCCGAG GCCGGGCTGC GCGAGCGCAA CGTGCGCGGG 
CGCGCCCGCG CCGAGATGCT CGATGCCGAG GCCGCGCGCG TGATCCTTCA ACAGTATCTC 
GATCAATTGT CCGACCATGA GCACCATTGA
 
Protein sequence
MSGASARDAT LLGFDYGEKR IGVAIGNALT RSARALVVIP NLNREHRFKA VGDLLAEWRP 
DALVVGLPMH PDGTPHEMTQ QAKRFGNQLN GRFGLPVTWV DERYSSVEAE AGLRERNVRG 
RARAEMLDAE AARVILQQYL DQLSDHEHH