| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0869 |
|---|
| Symbol | |
|---|
| ID | 6281934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 968563 |
|---|
| End bp | 969003 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642620431 |
|---|
| Product | Holliday junction resolvase-like protein |
|---|
| Protein accession | YP_001894514 |
|---|
| Protein GI | 187922872 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
|---|
| TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0747835 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTGC CGGCCGGACG TGAGGCGACG CTGCTTGCGT TCGACTACGG TGAAAAACGC
ATCGGCGTGG CGGTCGGCAA TTCGCTGACA CGTCGCGCGC GGCCGCTCGT GATCGTGCAG
AACCGCAGCC GCGAATATCG CTTCGAGGCA GTCGGCAAAC TGATTGCCGA GTGGAAGCCG
GACGCGCTTG TAGTCGGGCT GCCATTCCAT CCGGACGGCG CGCCGCACGA AATGACGCAA
CTCGCGAAGC GCTTCGGCAA CCAGCTGAAT GGCCGCTTCA ATCTGCCGGT CACGTGGGTC
GACGAACGCT ATTCGTCGGT CGAGGCGAAG GCGGAAATCC GCGCCGGCAA CGGCCGCGCC
GACATGCTCG ATGCCGAAGC CGCCAGCATC ATCCTCCAGC AATATCTAGA CGGACTTTCC
GACGATCATG AGTTCCATTG A
|
|---|
| Protein sequence | MSLPAGREAT LLAFDYGEKR IGVAVGNSLT RRARPLVIVQ NRSREYRFEA VGKLIAEWKP
DALVVGLPFH PDGAPHEMTQ LAKRFGNQLN GRFNLPVTWV DERYSSVEAK AEIRAGNGRA
DMLDAEAASI ILQQYLDGLS DDHEFH
|
|---|
| |