Gene Shew185_3035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3035 
Symbol 
ID5369572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp3629499 
End bp3629924 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content46% 
IMG OID640831277 
ProductHolliday junction resolvase-like protein 
Protein accessionYP_001367229 
Protein GI153001548 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00000814628 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCGA AAACCGTATT AGGCTTTGAT TTTGGCACTA AAAGTATTGG TGTGGCTATA 
GGCCAAGAAA TCACCGCTAG CGCCACGCCA TTATTGTCAA TCAAAGCCGT CGATGGGATC 
CCCAACTGGG ATCAGATAGG CGATTTAATC AAAGAGTGGC AACCCGACCT AGTGGTTGTT 
GGTCTGCCCT TAAACATGGA TGGCACTGAG CAAGATATGA CCCACAGGGC GCGTAAATTT 
GCGAACCGTA TCAATGCTAA GTTCAAAGTC AAAATAGCCA CTCAAGATGA GCGATTAACC 
ACTACCGATG CTAAGGCGAG ATTATTCGAG TTAGGCGGAT TCAAGGCGCT CACCAAAGGC 
CAAGTCGATG CTGTGTCTGC CGTACTGATT ATTGAAAGCT ACTTCGAAAA TAACTTCAGC 
AAGTAA
 
Protein sequence
MNSKTVLGFD FGTKSIGVAI GQEITASATP LLSIKAVDGI PNWDQIGDLI KEWQPDLVVV 
GLPLNMDGTE QDMTHRARKF ANRINAKFKV KIATQDERLT TTDAKARLFE LGGFKALTKG 
QVDAVSAVLI IESYFENNFS K