Gene SO_3347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3347 
Symbol 
ID1171029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp3492623 
End bp3493048 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content42% 
IMG OID637345152 
ProductHolliday junction resolvase-like protein 
Protein accessionNP_718901 
Protein GI24374858 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCTA AAACCGTATT AGGTTTTGAT TTTGGGACAA AAAGCATAGG TGTTGCCGTA 
GGGCAACAAA TTACCGCCAG TGCAACACCA CTTTTATCTA TCAAAGCCGT TGATGGCATT 
CCAAATTGGG AAGAAATCGC AAAACTCATC CAAGAGTGGC AACCCGATTT AGTGGTCGTC 
GGTTTACCGC TCAACATGGA TGGTACAGAG CAAGAAATGA CCCACAGGGC GAGAAAATTT 
GCCAACCGAC TTAACGCAAA GTTTGGCGTT AAAATTTTCA CCCAAGATGA AAGACTAACC 
ACCACAGATG CAAAAGCCAG ACTCTTTGAA TTAGGTGGTT ATAAAGCGCT AACAAAAGGT 
CAAGTCGATG CGGTTTCTGC GGTACTGATT ATCGAAAGTT ATTTTGAAAA TCATTTTGGT 
GATTGA
 
Protein sequence
MNAKTVLGFD FGTKSIGVAV GQQITASATP LLSIKAVDGI PNWEEIAKLI QEWQPDLVVV 
GLPLNMDGTE QEMTHRARKF ANRLNAKFGV KIFTQDERLT TTDAKARLFE LGGYKALTKG 
QVDAVSAVLI IESYFENHFG D